Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0744 ATGGAAGAAGCACTGCGTCGTCTGAACGGAATGGCCCCTACTCAAGAACCTGACACGCACGACTCAACCTCTGACAACCACCACAAGAAGTGCGCCACCAGGAAGTCGTTGCGCGAAACCGCCAACGCTGGCGGCGCCATGAGGTACCGCGGCGTCCGGCGCCGTCCATGGGGCCGTTACGCCGCCGAAATAAGAGACCCGCAGTCGAAGGAGAGGCGCTGGCTCGGCACATTCGACACTGCTGAGGAAGCTGCTTGCGCCTACGACTGCGCCGCTCGAGCCATGCGCGGCGTCAAAGCACGAACCAATTTCGTTTACCCTGACACCACCGAAGCACACCTTTTCCAACCCTTCCATATTCCGAAGCAGTCTCAGAACTGCCACGTCAGCAGGTTCGGACCCAATAATCCCAACTTGGGTGGTGACTTCTCGTCACCGACGCAGAACAACAATGCTTCTGCCCTCAACATGCATTTCTTTCGTGACTTCCTCAACTCTTCTTCGAACTCCTGTTTGGTTTCTTCTTCTCCGGTTCCACAGTTTCACAACAAGGCTTCGAATGGTTCTTTTAACTCCTCGTCTTCCACTTCGTCTTTGTTATTACCTGTGTCAGCCTGTTTCCAAGGTTGCTGTGTTGGCAATGGTAATAATATAAGTGGTGTTGTTGGTGCCAATCATAAAACGGAAGTGCTTGACACCATTGAAGATGACTCTGGGTTCTTTCCCAGAGAGTCTTCGGATTCTGGCTTGTTGGAAGAGATAGTTCATAAGTTTTTGCCTAAGTCAAGGCCTAGGAATTGTGAGACTACGCTGAAAACAGAGACTTTGTCCGTTCATGAGTCGCTTCCTCAACCAATTTCTGATCACATGGTGGTCTCTGCCACTCGGTTTTACGATGATCAGAGGACGAGGGTTCCCAAAATTGAATCTTATGGTATTTCTTATGATCCTCCCATGCAACAATTTGAAAATTATAACGGGTTTAACACCATACAACAGGCTATGTCCATGGGAAGTGATGAGAAGTTTATGATGAATCATATTGCAGAATGTTCCTTCATGGAAGATGTTCTTCAGTATCCAGAGTTTTTCAATTCTCTTGCAGCTAGAATGCAAAATGCTTGA 1125 0.4871 MEEALRRLNGMAPTQEPDTHDSTSDNHHKKCATRKSLRETANAGGAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGVKARTNFVYPDTTEAHLFQPFHIPKQSQNCHVSRFGPNNPNLGGDFSSPTQNNNASALNMHFFRDFLNSSSNSCLVSSSPVPQFHNKASNGSFNSSSSTSSLLLPVSACFQGCCVGNGNNISGVVGANHKTEVLDTIEDDSGFFPRESSDSGLLEEIVHKFLPKSRPRNCETTLKTETLSVHESLPQPISDHMVVSATRFYDDQRTRVPKIESYGISYDPPMQQFENYNGFNTIQQAMSMGSDEKFMMNHIAECSFMEDVLQYPEFFNSLAARMQNA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0744 374 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 374 - -
Apr3g0744 374 MobiDBLite consensus disorder prediction 20 36 - -
Apr3g0744 374 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Apr3g0744 374 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Apr3g0744 374 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 374 - -
Apr3g0744 374 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Apr3g0744 374 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Apr3g0744 374 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Apr3g0744 374 MobiDBLite consensus disorder prediction 1 44 - -
Apr3g0744 374 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Apr3g0744 374 CDD AP2 48 104 IPR001471 GO:0003700|GO:0006355
Apr3g0744 374 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0744 Apr-Chr3 19585363 19586487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0744 1 284 AP2-EREBP Transcription Factor Family AT1G24590 37.338 7.70e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr3g0744 AP2 7.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0744 - - aprc:113860142 717.613