Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0734 ATGAGACGAGAAACGGAGACAGATAACATAACCCGAGTCAGGTCCGAACCCGGACCCGATTCTCTCTATTCATGCGTCACACTCCTTACGCGCCGCGCCTTCAGCGCCTGTCACGAGATGGCTACTCGGGTCCCAAGATCCGACCCGAACATCGCACTCCAACTCGACCAAATCCTCGCCATAGCTGACGTCCTCTCCGCCGCCGAACACCGCCACGGCATCGGCCACCATCGCGACTGGTACTCCATCCTCCAGCTCCGCCCGGACGACGCTGCCGCGAACCGCGACCTCGCTCGTCAACGGTTCAAGACGCTGGTGCGCCTCCTCGACCCGAACAAGAACAAGTTCCCCCTCGCCGACGACGCGCTCATGCGCGTGCGCGAGGCGTGGTTTGTTCTCTCTGACTCGGCCCGAAAGGACCGGTTCGACCGCGAGATCCGTGAGGCCGCGACGTCGTTTTGGACAATGTGCCCTTACTGCTGGTACCTGCACCAGTACGAGAGGAAATACGAGGATTGCACTCTGAGGTGCGCGAATTGCCGGAGGACGTTTCACGGCGAGGCGGTGAGGCCGCCGCCGCCGGAGACGGTGGTGGAGGGGAAGGAGCAGTACTATTGCTACCACGTGAGTTTTCCCCTTAGGTACCCTGTCGATGAAGAACGACTTCGTTTCGGTAGCGATTATGAGGATAAGGGGAATGGAGTGAACGACAATGCGCTGAGCGGTGGGAGAAAGAGGTTGAGGATTAAAACGGTGGCTAATAGGGTGAGAATGAAAGGGTATGTTGATGGCAATAGTGACTCGGATTTGGATGCAGATGAAAAGGATGGAAATGATTTTGGAACTTAG 849 0.5771 MRRETETDNITRVRSEPGPDSLYSCVTLLTRRAFSACHEMATRVPRSDPNIALQLDQILAIADVLSAAEHRHGIGHHRDWYSILQLRPDDAAANRDLARQRFKTLVRLLDPNKNKFPLADDALMRVREAWFVLSDSARKDRFDREIREAATSFWTMCPYCWYLHQYERKYEDCTLRCANCRRTFHGEAVRPPPPETVVEGKEQYYCYHVSFPLRYPVDEERLRFGSDYEDKGNGVNDNALSGGRKRLRIKTVANRVRMKGYVDGNSDSDLDADEKDGNDFGT* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0734 282 Pfam DnaJ domain 79 143 IPR001623 -
Apr3g0734 282 CDD DnaJ 79 135 IPR001623 -
Apr3g0734 282 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 11 272 - -
Apr3g0734 282 ProSiteProfiles dnaJ domain profile. 79 146 IPR001623 -
Apr3g0734 282 SUPERFAMILY Chaperone J-domain 73 146 IPR036869 -
Apr3g0734 282 SMART dnaj_3 78 138 IPR001623 -
Apr3g0734 282 Gene3D DnaJ domain 73 153 IPR036869 -
Apr3g0734 282 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 11 272 - -
Apr3g0734 282 MobiDBLite consensus disorder prediction 263 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0734 Apr-Chr3 19235802 19237259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0734 28 215 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.971 9.17e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0734 - - gmx:102659715 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0734 3 19235802 19237259 Apr3g0734 3 19235802 19237259 PCT