Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0722 ATGGAATGGTTAGAGAGAAGGGGTAAGAAGGACGAAATGAAAGAAAAGACAAGGCACTGGAGATTGGAATTGATGATTGGGAACAACCAGAGGAAAGAGCTTGGATGCGACGACGACGTATTGGCGTCACCGACGGGTGTGTTTGAGGTGGCTATTTCGGGGGCGGATTCGGACAGCACAGGGAGCAGCAACTGCAGCGGTTCTGGGTCTCCTAGGATGGGCCCACAACGGGCTCAAGGGAGAGATGGGCACACTCAGCAATGGAAGGCAATGATCGATGCTTTGAGGTTCAAGTCGGTGAGAAGATTCTCGACCATTCCTTTGCTTGCGGCTAGCTACGAGATATCTCGGAGAAGCCTTAGAAACAAGTTGGCTCGCATTCGAACCGCTAACGAAGACGACGATTTGGATGCCGCTATTGATCTTGATGGTATTCCTACCAAGCCTTCTTGGAGGAACTTCACTTACGCTGATCTTGCTGCTGCCACCGACGATTTCAGCCCTCAGAACATGATTGGAAAAGGTGGTCATGCTGAAGTCTACAAAGGACACTTACCTGATGGTCAAGTTGTAGCAGTTAAGAGGCTAATGAAGAACGAAAAGGAAGCAGAGGACAGAGCTGGTGATTTCCTGTCAGAGCTTGGAATCATTGCTCACATTAATCACCCAAACGCAACACGCTTGATTGGGTTTGGGATCGACCATGGCCTCTACTTTGTTCTACAATTGGCCCCGCATGGCAGCCTTGCCTCTTTGCTCTTTGGTTCTGAATGCTTGGAGTGGAAGATAAGGTTTAAAGTAGCTGTTGGGGTAGCAAAAGGATTGCAATATCTTCATCACGATTGCCCAAGAAGAATCATTCACAGAGACATCAAAGCTTCTAACATATTACTAAACCAAAATGATGAAGCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTCCCAGATAAGTGGGCCCATCATGTTGTCTACCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAATACTTCATGCATGGAATTGTCGATGAGAAGACTGATGTTTTCGCATTTGGGGTCTTATTACTGGAGCTCATAACAGGTCGTCGTGCAGTTGATTCGAATAGTAGAGAAAGTCTTGTGATCTGGGCCAAACCACTGTTGGATGCAATGAGTGTCAAAGAAATGGCAGACCCCAAATTAGAAGAGAAATATGATCCCACAGAAATGAAGCGTGCCATGGAAACGGCTTCAATGTGTATCCACCACATGTCCTCTAAGCGGCCATACATGAATCAGGTTATGCAGCTACTGAAGGGAGAAGAGGTGGCTATTGAACTCGACCAAAAATCAATAGCTCCAAGATCGCTCCTGTTAGATGCATGTGACCTAGAAGATTATACTTGCTCTAATTATTTGAATGACCTCAATCGCCACAAGCAATTAATCATGGAGTGA 1443 0.4622 MEWLERRGKKDEMKEKTRHWRLELMIGNNQRKELGCDDDVLASPTGVFEVAISGADSDSTGSSNCSGSGSPRMGPQRAQGRDGHTQQWKAMIDALRFKSVRRFSTIPLLAASYEISRRSLRNKLARIRTANEDDDLDAAIDLDGIPTKPSWRNFTYADLAAATDDFSPQNMIGKGGHAEVYKGHLPDGQVVAVKRLMKNEKEAEDRAGDFLSELGIIAHINHPNATRLIGFGIDHGLYFVLQLAPHGSLASLLFGSECLEWKIRFKVAVGVAKGLQYLHHDCPRRIIHRDIKASNILLNQNDEAEISDFGLAKWLPDKWAHHVVYPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPLLDAMSVKEMADPKLEEKYDPTEMKRAMETASMCIHHMSSKRPYMNQVMQLLKGEEVAIELDQKSIAPRSLLLDACDLEDYTCSNYLNDLNRHKQLIME* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0722 480 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Apr3g0722 480 Gene3D Phosphorylase Kinase; domain 1 141 241 - -
Apr3g0722 480 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 480 - -
Apr3g0722 480 SUPERFAMILY Protein kinase-like (PK-like) 149 436 IPR011009 -
Apr3g0722 480 Gene3D Transferase(Phosphotransferase) domain 1 245 448 - -
Apr3g0722 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Apr3g0722 480 ProSiteProfiles Protein kinase domain profile. 166 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0722 480 Pfam Protein kinase domain 169 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0722 480 PANTHER OS08G0249100 PROTEIN 1 480 - -
Apr3g0722 480 SMART serkin_6 166 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0722 480 MobiDBLite consensus disorder prediction 55 73 - -
Apr3g0722 480 MobiDBLite consensus disorder prediction 52 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0722 Apr-Chr3 18902041 18905095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0722 153 436 Trihelix Transcription Factor Family AT1G70460 44.898 4.70e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Apr3g0722 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0722 - - gmx:100794225 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1704 7 24292054 24296859 Apr3g0722 3 18902041 18905095 PCT