Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0718 ATGAACATGTTTTCTAATCTATGTTGCTATGTTTTCTTTCCTCTTCTACTTGGTCTTGCACTTTTTCCACAGATATCATCTCAGCTTGAAACTTCTCACAAGGTAGAACTGCTTCCTGGCTTACAAGGGCCTCTTCCCTTTGAACTTGAAACTGGGTATGTGGGGTTGGGAGAGTCAGATGATGATATGCAAGTCTTCTACTACTTTATTAAGTCAGAGAAGGACCCTGAGAAAGACCCTCTTATGCTTTGGCTAACTGGGGGCCCCGGTTGCTCTTCATTTTCTGGCCTTGCTTTTCAAATAGGTCCATTTGCATTTAAAATTGAGGAGTATGACGGGAGCTTGCCAAATTTGGTCTTGAGGCCACAGTCCTGGACCAAGGCTTGTAGCATTATTTTTGTAGATTTACCTTTTGGAACTGGCTTCTCCTATGCGAAAAATGTCAGAGCTCAAAGAAATGACTGGAATTTAGTTCACCATTCCTATCAATTTATTAGGAAGTGGCTGATTGATCACCCAGAATTTCTTTCAAATGAATTTTACGTTGGAGCTGATTCATACTCTGGCATTCCTGGCCCTGCTATTGCTCATGAAATTTCAATCGGAAATGAAATAGGTCTCCAACCATGGATAAATCTCCAGGGATATCTGCTAGGGAACCCCATAACAACCCGGAGAGAAAAAAATTATCAAATCCCCTATGCTCATGGAATGGGACTTATTTCTGATGAACTCTATGCTTTACTACAGAGAAATTGTAAAGGAGAGTATATAGATATAGATACCTCAAATGAAATTTGTCTTAGAGATCTCGACTACTTTGATGAGTGCCTTTCAGGAATTAATAAGTTCTTCATTTTGGATATCTATTGCAAAGATGATTCGGCTTTGTGGAGGAGATCTCTGACTCAGAAGTCGATGGCCTCTCTTAATTCTTATCTCAGAATACCAGACATAAAATGCCAAATTTATAGTTTTTTCCTTGCCACTCAATGGGCCAATGATGAGAGTGTTCGCAAGGCGCTGCATATTCGAGAGGGAACTATAGACAAATGGGAACGATGTTACACTACTGATTTTGACCATCAGATCCAGAGTAGCTTTGAGTTTCATGTAAATCTCAGTGCAAAAGGCTATCGTTCCTTAATATACAGTGGGGATCATGACCTTGTTGTTCCTTTCACATCGACTCAAGCATGGATAAGGGCTCTAAACTACTCCATTGTGGACGATTGGAGACCATGGTTTTTAAATGGCCAAGTTGCAGGATACACAAGGGCTTACTCGAATAAAATGACATTTGCAACTGTGAAGGGTTCAGGACATACAGCTCCCGAGTACAAGCCTGATGAAGGTTTCGCCATGTTCACTAGGTGGATAGCTAATGAGCCTTTGTAA 1398 0.4077 MNMFSNLCCYVFFPLLLGLALFPQISSQLETSHKVELLPGLQGPLPFELETGYVGLGESDDDMQVFYYFIKSEKDPEKDPLMLWLTGGPGCSSFSGLAFQIGPFAFKIEEYDGSLPNLVLRPQSWTKACSIIFVDLPFGTGFSYAKNVRAQRNDWNLVHHSYQFIRKWLIDHPEFLSNEFYVGADSYSGIPGPAIAHEISIGNEIGLQPWINLQGYLLGNPITTRREKNYQIPYAHGMGLISDELYALLQRNCKGEYIDIDTSNEICLRDLDYFDECLSGINKFFILDIYCKDDSALWRRSLTQKSMASLNSYLRIPDIKCQIYSFFLATQWANDESVRKALHIREGTIDKWERCYTTDFDHQIQSSFEFHVNLSAKGYRSLIYSGDHDLVVPFTSTQAWIRALNYSIVDDWRPWFLNGQVAGYTRAYSNKMTFATVKGSGHTAPEYKPDEGFAMFTRWIANEPL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0718 465 Pfam Serine carboxypeptidase 39 462 IPR001563 GO:0004185|GO:0006508
Apr3g0718 465 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 12 462 - -
Apr3g0718 465 Gene3D alpha/beta hydrolase 33 465 IPR029058 -
Apr3g0718 465 SUPERFAMILY alpha/beta-Hydrolases 38 464 IPR029058 -
Apr3g0718 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Apr3g0718 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Apr3g0718 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Apr3g0718 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185|GO:0006508
Apr3g0718 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 462 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0718 Apr-Chr3 18704808 18710339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0718 328 465 Calmodulin-binding Proteins AT2G22960 62.590 4.99e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0718 K16296 - gmx:100780069 779.245