Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0703 ATGGGGAAAAAAGGGAGTTGGTTTTCTGCAGTCAAGAAAGTTTTCAGTCCAGATTCCAAAAAGGAAAAGAAAAAGCACAAGTCAAAGAAACAAAGTGGTTACAAGGATTCGGAAGTAGCATATGCAGAAGCAGCAACCCCTCTTCCACCAATAGATAGTGTTAAAGAAAATGAACAGAACAAGCATGCATTTTCTTTGGCTCTTGCCAGTGCTGTTGCAGCAGAGGCTGCTGTTGCTGCTGCTCAGGCTGCTGCAGAGGTTGTGCGTCTCACAAGTATGCCTCACTACCATGGAAAGACCAACCAAGAAATAGCAGCTACCAAGATTCAAACGGCATTCCGCGGATATATGGCAAGAAGGGCATTGCGCGCATTGAGAGGTTTGGTGAGACTGAAAACACTGATACAAGGACAATCTGTTAAGAGGCAAGCAAGTAGCACCTTACGATGCATGCAAACTCTGGCAAGTTTACAGTCTCAGATTCGCGAAAGGAGAATTAGAATGTCTGAGGAGAACAAGGCCCTTCAGCACCAACTACAGCAGAAACATGAAAAGGAACTTGAGAAGTTGCAAGTTGCTCAGGTTGGAGAAGAATGGGATGACAGCTTGCAGTCAAAGGATCAAATTGAAGCAAAATTGTTGCAAAAACAAGAAGCTGCTTTGAGAAGAGAGAGAGCTTTGGCCTATTCATTCTCACATCAGCAAACTTGGAAGAGCTCTTCAAAATCAGTAAATCCTACATATATGGATCCAAATAATCTTCACTGGGGGTGGAGCTGGCTAGAGAGATGGATGGCTGCCAGGCCATGGGAGGGCCAAAGCACAATGGATCACAATGATCATTCATCACTGAAGAGTGCAGCAAGTGTAGGAGAAATCACCAAAACGTATTCACTCCGCGGCAATAGTCATGATAATAGGCCTTCCCCTTTTGGCCAAAAAGCGAGAAGACATGCCACTCACAACTCCCCTTCAACTCCAGCTTCAAAGGCAAAATCTGCTACTGGAAAGGTAAGGCCATCAAGCTCAAAGGGTAGTGCATGGGGTGGTGATGAAGACTCAAGAAGCATGCTAAGTGTTCAGTCAGAACGTTATCGCAGACATAGCATTGCAGGATCCTCAGTGAGAGATGATGAAAGCCTTGCAAGCTCACCTGCCATTCCAAGTTACATGACACCCACAAGTTCAGCAAAGGCCAAGTCCAAAATCCAAAAGCCATCACCTGAAAAAGGAGCCGCTGCTGTTTCTGCCAAGAGGCGACTTTCTTTCTCCCCTTCTTCGGCTGGTTCAAGAAGACATTCTGCTCCTCTTATGGTGGAAATGGTTTCCAAAAAAGATGTTGCTGCTATGGTTAGCAATGGAGGGGGCAGGTAG 1374 0.4563 MGKKGSWFSAVKKVFSPDSKKEKKKHKSKKQSGYKDSEVAYAEAATPLPPIDSVKENEQNKHAFSLALASAVAAEAAVAAAQAAAEVVRLTSMPHYHGKTNQEIAATKIQTAFRGYMARRALRALRGLVRLKTLIQGQSVKRQASSTLRCMQTLASLQSQIRERRIRMSEENKALQHQLQQKHEKELEKLQVAQVGEEWDDSLQSKDQIEAKLLQKQEAALRRERALAYSFSHQQTWKSSSKSVNPTYMDPNNLHWGWSWLERWMAARPWEGQSTMDHNDHSSLKSAASVGEITKTYSLRGNSHDNRPSPFGQKARRHATHNSPSTPASKAKSATGKVRPSSSKGSAWGGDEDSRSMLSVQSERYRRHSIAGSSVRDDESLASSPAIPSYMTPTSSAKAKSKIQKPSPEKGAAAVSAKRRLSFSPSSAGSRRHSAPLMVEMVSKKDVAAMVSNGGGR* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0703 457 PANTHER IQ-DOMAIN 5-RELATED 1 453 - -
Apr3g0703 457 MobiDBLite consensus disorder prediction 376 402 - -
Apr3g0703 457 MobiDBLite consensus disorder prediction 297 436 - -
Apr3g0703 457 SMART iq_5 101 123 IPR000048 GO:0005515
Apr3g0703 457 Pfam IQ calmodulin-binding motif 105 123 IPR000048 GO:0005515
Apr3g0703 457 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 453 - -
Apr3g0703 457 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Apr3g0703 457 MobiDBLite consensus disorder prediction 17 38 - -
Apr3g0703 457 Coils Coil 165 185 - -
Apr3g0703 457 MobiDBLite consensus disorder prediction 316 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0703 Apr-Chr3 18055637 18061174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0703 1 456 IQD Protein Family AT5G03040 48.125 5.86e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0703 - - gmx:100780294 565.459