Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0696 ATGTCAAAAGAATATTTAACTGAGAGAGGTTCCTACTCTGCAAAGGACTACCATGACCCTCCTCCAGCACCCTTGATTGATGCTGAGGAACTCACTCAGTGGTCCTTCTACAGGGCTTTGATAGCTGAATTCATTGCCACACTGCTCTTTCTTTACATCACAGTGCTCACTGTGATTGGGTATAAGAGTCAGAGTGATGTCAAAGCTGGGGGTGATGTTTGTGGTGGGGTTGGCATTCTTGGCATTGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTGTACTGCACCGCTGGAATTTCAGGGGGTCACATAAACCCAGCAGTGACATTTGGACTCTTCTTGGCTCGCAAGGTGTCTTTGATTAGAGCAATCATGTACATGGTGGCTCAGTGCTTGGGGGCAATTTGTGGAGTTGGGTTGGTTAAGGCCTTCCAAAAGGCTTACTACAACAGGTATGGTGGTGGAGCCAATGAGCTCAGTGATGGGTACAGCACAGGTGTTGGATTGGGTGCTGAGATCATTGGAACCTTTGTTTTGGTATACACTGTATTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGGTTTTGGCTCCACTTCCAATTGGATTTGCTGTATTTATGGTTCACTTGGCAACCATCCCAGTCACTGGCACTGGCATTAATCCTGCTAGGAGTCTTGGAGCTGCTGTTATCTACAACCAAGATAAAGCCTGGGATGACCAATGGATCTTTTGGGTAGGACCATTTGTTGGGGCTGCCATTGCAGCCTTCTACCACCAATTCATCTTGAGAGCAGGTGCAGCTAAGGCTTTGGGATCATTCAGGAGCAACCCCACTGTTTGA 861 0.4774 MSKEYLTERGSYSAKDYHDPPPAPLIDAEELTQWSFYRALIAEFIATLLFLYITVLTVIGYKSQSDVKAGGDVCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQKAYYNRYGGGANELSDGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNQDKAWDDQWIFWVGPFVGAAIAAFYHQFILRAGAAKALGSFRSNPTV* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0696 286 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Apr3g0696 286 CDD MIP 38 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr3g0696 286 PANTHER AQUAPORIN PIP2-4-RELATED 7 283 - -
Apr3g0696 286 Gene3D Glycerol uptake facilitator protein. 23 286 IPR023271 -
Apr3g0696 286 TIGRFAM MIP: MIP family channel proteins 42 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr3g0696 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 283 IPR034294 -
Apr3g0696 286 SUPERFAMILY Aquaporin-like 30 270 IPR023271 -
Apr3g0696 286 Pfam Major intrinsic protein 30 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr3g0696 286 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr3g0696 286 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr3g0696 286 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr3g0696 286 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr3g0696 286 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr3g0696 286 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0696 Apr-Chr3 17886662 17894619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0696 1 286 Major Intrinsic Protein MIP AT3G54820 81.818 3.65e-177 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0696 K09872 - gmx:547857 548.895