Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0685 ATGAGCAGGTATGAGTACACCCTCACATCTTTCCTTTGTATTTTGTTTCTCTTTTGTTTCTGTCCTCTGGTGTTGTCCCTGCTATCTCAAAGCCAAACAGACATCATGATCAAACTATCGAAAAATCCTGAATTTTCTGGTCAATGGAGTGGCTCAAACCCATGTGCATGGAAGGGAGTGACTTGTGACCCTACCAATTCCTCAGTAAGAGAGATTTCTCTATCTGGGTTTGGACTCTCTTCCTCCAACTTTCTTCTTGTTTGTAAAATTGAAACTTTGGAGCATCTTGATGTCTCCAATAACCGTTTGAGCTCAATCCCTGAAGATTTCTTCACTGAGTGTGGAAAGATTAAGGGGTTGAAGCTGCTGAATTTCACTGGAAACAAGTTAAGGGGTGCTTTTCCTACTTTCAATGGTTTTGATGGATTGGAATCCCTGGATATGTCTTTCAATCAGTTGGAAGGGAATATTGGTTTACAGTTAGATGGGTTGGTTAGTCTCAAGAGTTTGAATCTTAGTTTCAATTTCTTCATGGGCTCTCTCCCTACTAAACTGGGAAAGTCCATGGTTTTGGAACAGCTTGTGCTTTCTGGCAATTACTTTCATGGAAAAATCCCTGATGATTTATTGAGTTATGAAAATTTGACTGGGATTGATTTTAGGGGAAATAATATTTCTGGTACTATTCATAGCAATATTGGGAAGCTATCTAAATTGGAAACTTTGATCCTTTCTTCTAATAACCTCGCTGGTGAAATTCCACCATCACTTATGGACATCACTAAACTTACTAGATTTGCGGCAAATCTGAATCATTTCAATGGTTCTGTACCTCCTGGGATTACTAAATATCTCACTAGTTTGGATCTTAGTTATAATCAATTGTCTGGCTCCATTCCTGAAGGTCTTTTATCTCCACAACAATTGCAGGTTGTAGATTTGTCCAATAACAATTTAACAGGGTCATTACCTTCTAAAGTTTCTCCTAGTTTGATCAGGTTGAGGTTTGGGGGCAATCTTCTGAGGGGAAATATTCCTTCAGATGCTTTTTCAACAGCTCAAAATTTGACCTACTTGGAGCTGAACAACAATGAGTTAACGGGATCGATACCGGTTGAGTTGGGTTCTTGCAAGAAGTTGGCATTGTTGAATTTAGCTGAGAACCAGTTGAGTGATGTATTGCCACCCTGGCTTGGTGATCTAAACAATCTTCAAGTCTTGAAGCTTGAAATGAACAACCTTAATGGTACAATCCCAATTGAAATTGGTCAACTTCAGAAGTTATCAACATTGAATTTGAGCTGGAATTCTCTGAGTGGATCAATTCCATCTGAGATTTCAAATTTGAGCAGTCTGGCTTTCCTTTACTTACAAAGCAACAATCTGCGTGGTTTTATACCAACATCCATTGACAAGTTGAAATTACTTATAGAACTCCAACTTGGGGAAAACCAGCTAGGTGGTGTGATCCCAAACATGCCATTGAGTTTGCAGGCTTCGCTGAATCTTAGTAGCAACCGCTTTAGTGGTTCTATTCCTAGCAGTTTAAGTAATTTAAATAACTTGGAAGTCTTGGATCTCTCAAATAACAAATTTTCTGGTGAAATTCCTGAGGATTTAACCCGAATGTCGGCTTTGACTCAATTTTTAATTTCTAACAATCAACTTACTGGTGTCATTCCGAAATTTAGTGGTCATGTTATCATTGATTTTAAAGGAAATCCAAATCTGTCAATGAATACTACTACACCGGACAGCCCAACACCCTACTCAAGCTCTGCAAAGAAGGGAATATCTGTTGCTGTGGCAATTTTGATTGCAATTGTAGCAGCTATTTTTATTGTTGGCATTGTCACTCTGCTTGTTGTGTCAGTGTCACGACACTATTACAGGGTTAACGACGAGCATTTACCGTCGGGAGAAGATCATCACAATCCTCAGGTCATCCAAAGTAATTTATTGACCCCTAATGGAATCCACAGATCAAGCATTGACTTCTCCAAAGCCATGGAAGCCGTAGCTGAAACATCAAATGTTACTCTGAAAACAAGGTTTTCAACTTATTATAAAGCCATCATGCCATCTGGATCAACCTATTTCGTCAAGAAACTGAACTGGTCTGACAAGATATTGCCCGTGGGAACTCATGATAAATTCGGGAAAGAACTAGAGGTGTTGGCAAAATTGAACAATTCAAATGTCATGACCCCTTTGGCCTATGTTCTGTCTACTGACACTGCTTATATACTGTATGAATATGTCTCAAATGGCTCCCTCTTTGATGTTCTTCATGGAAGCATGGAAAACTCTTTGGATTGGGCTAGCAGATATAGTATAGCTGTTGGGGTGGCTCAAGGACTTTCTTTTCTCCATGGATTTGCCTCTAGTCCAATACTTCTCCTTGACCTATCGAGTAAAAGTATTATGCTCAAGTCCCTCAAGGAGCCTCTAGTTGGGGATATTGAACACTACAAGGTGATTGATCCCTCAAAAAGTACAGGGAATTTTTCTGCCGTTGCTGGTTCTGTTGGTTATATTCCACCAGAGTATGCATACACAATGACAGTAACAATGGCTGGGAATGTCTACAGCTTTGGTGTCATTCTGCTTGAACTGCTGACAGGAAAACCTGCGGTGACCGAGGGAACGGAATTGGTCAAATGGGTTTTGCGTTACTCAACAAACCAGGATTACATTCTTGATCTTAATGTCAGTAGAACATCACAAGCTGTCAGAAACCAAATGCTTGCAATGCTCAAGATTGCTCTTGTTTGTGTTAGCACATCCCCAGAAACAAGACCAAAGATGAAGAGCGTTCTAAGGATGCTCCTCAATGCTAGATGA 2844 0.3984 MSRYEYTLTSFLCILFLFCFCPLVLSLLSQSQTDIMIKLSKNPEFSGQWSGSNPCAWKGVTCDPTNSSVREISLSGFGLSSSNFLLVCKIETLEHLDVSNNRLSSIPEDFFTECGKIKGLKLLNFTGNKLRGAFPTFNGFDGLESLDMSFNQLEGNIGLQLDGLVSLKSLNLSFNFFMGSLPTKLGKSMVLEQLVLSGNYFHGKIPDDLLSYENLTGIDFRGNNISGTIHSNIGKLSKLETLILSSNNLAGEIPPSLMDITKLTRFAANLNHFNGSVPPGITKYLTSLDLSYNQLSGSIPEGLLSPQQLQVVDLSNNNLTGSLPSKVSPSLIRLRFGGNLLRGNIPSDAFSTAQNLTYLELNNNELTGSIPVELGSCKKLALLNLAENQLSDVLPPWLGDLNNLQVLKLEMNNLNGTIPIEIGQLQKLSTLNLSWNSLSGSIPSEISNLSSLAFLYLQSNNLRGFIPTSIDKLKLLIELQLGENQLGGVIPNMPLSLQASLNLSSNRFSGSIPSSLSNLNNLEVLDLSNNKFSGEIPEDLTRMSALTQFLISNNQLTGVIPKFSGHVIIDFKGNPNLSMNTTTPDSPTPYSSSAKKGISVAVAILIAIVAAIFIVGIVTLLVVSVSRHYYRVNDEHLPSGEDHHNPQVIQSNLLTPNGIHRSSIDFSKAMEAVAETSNVTLKTRFSTYYKAIMPSGSTYFVKKLNWSDKILPVGTHDKFGKELEVLAKLNNSNVMTPLAYVLSTDTAYILYEYVSNGSLFDVLHGSMENSLDWASRYSIAVGVAQGLSFLHGFASSPILLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGNFSAVAGSVGYIPPEYAYTMTVTMAGNVYSFGVILLELLTGKPAVTEGTELVKWVLRYSTNQDYILDLNVSRTSQAVRNQMLAMLKIALVCVSTSPETRPKMKSVLRMLLNAR* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0685 947 PRINTS Leucine-rich repeat signature 285 298 - -
Apr3g0685 947 PRINTS Leucine-rich repeat signature 519 532 - -
Apr3g0685 947 Pfam Leucine Rich Repeat 427 449 IPR001611 GO:0005515
Apr3g0685 947 Pfam Leucine rich repeat 500 556 IPR001611 GO:0005515
Apr3g0685 947 Pfam Leucine rich repeat 92 153 IPR001611 GO:0005515
Apr3g0685 947 Pfam Leucine rich repeat N-terminal domain 40 63 IPR013210 -
Apr3g0685 947 PANTHER F12K21.25 14 944 - -
Apr3g0685 947 SMART LRR_typ_2 164 188 IPR003591 -
Apr3g0685 947 SMART LRR_typ_2 90 113 IPR003591 -
Apr3g0685 947 SMART LRR_typ_2 236 260 IPR003591 -
Apr3g0685 947 SMART LRR_typ_2 354 377 IPR003591 -
Apr3g0685 947 SMART LRR_typ_2 425 449 IPR003591 -
Apr3g0685 947 SMART LRR_typ_2 519 543 IPR003591 -
Apr3g0685 947 SMART LRR_typ_2 285 306 IPR003591 -
Apr3g0685 947 SUPERFAMILY L domain-like 53 324 - -
Apr3g0685 947 Pfam Leucine Rich repeat 284 297 IPR001611 GO:0005515
Apr3g0685 947 SMART LRR_sd22_2 353 374 - -
Apr3g0685 947 SMART LRR_sd22_2 425 451 - -
Apr3g0685 947 SMART LRR_sd22_2 140 161 - -
Apr3g0685 947 SMART LRR_sd22_2 212 235 - -
Apr3g0685 947 SMART LRR_sd22_2 236 262 - -
Apr3g0685 947 SMART LRR_sd22_2 519 542 - -
Apr3g0685 947 SMART LRR_sd22_2 90 111 - -
Apr3g0685 947 Gene3D Ribonuclease Inhibitor 285 588 IPR032675 -
Apr3g0685 947 ProSiteProfiles Protein kinase domain profile. 674 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0685 947 Gene3D Phosphorylase Kinase; domain 1 647 753 - -
Apr3g0685 947 Pfam Protein kinase domain 685 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0685 947 SUPERFAMILY RNI-like 252 575 - -
Apr3g0685 947 Gene3D Ribonuclease Inhibitor 32 139 IPR032675 -
Apr3g0685 947 Gene3D Ribonuclease Inhibitor 140 212 IPR032675 -
Apr3g0685 947 Gene3D Ribonuclease Inhibitor 213 284 IPR032675 -
Apr3g0685 947 ProSiteProfiles Leucine-rich repeat profile. 92 113 IPR001611 GO:0005515
Apr3g0685 947 SUPERFAMILY Protein kinase-like (PK-like) 685 943 IPR011009 -
Apr3g0685 947 Gene3D Transferase(Phosphotransferase) domain 1 754 947 - -
Apr3g0685 947 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0685 Apr-Chr3 17650011 17654008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0685 120 947 Receptor kinase-like Gene Family AT2G41820 36.756 1.69e-149 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr3g0685 Pkinase 2.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0685 - - gmx:100796647 1346.64