Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0668 ATGGCGTCTGAGGGCTTCACCGACAAGAACACTGTGTTCAGGAAACTCAAGGCCAAGTCTGAAAATAAGATGTGTTTCGAATGCAATGCGAAGAACCCTACCTGGGCGTCTGTCACGTATGGGATCTTCATCTGCATCGATTGCTCCGCCGTTCATCGCAGTCTCGGGGTGCACATCAGCTTCGTGAGGTCTACGAATTTAGACTCATGGAGTCCTGAGCAACTAAAAATGATGAGTTTTGGAGGAAACAATCGTGCACAGGTTTTCTTTAAGCAACATGGTTGGACTGAGGGTGGTAAAATAGAGGCAAAGTATACATCAAGAGCTGCTGAATTGTATAGGCAAATTCTTTCAAAGGAAGTAGCTAAAAGTATGGCCGAGGATGGTGGAAGCTTGCCTTCATCACCTGTTGCTTCACAGTCTTCCCATGGGGCTAATGGACTGCCTGAAGTGAGGACACATGAAGTACCAAAAGAAAACAGTCTGGAAAAGCCAGAAAATCCTGAGAGCACTTCACCTAGAGCTTTGCATACAATAGTCTCAAGCACTGTCAAGAAACCTATTGGTGCTAAAAAAACTGGGAAGAGTGGTGGGCTTGGTGCTCGTAAGCTCACTAAAAAGCCAAGTGAGTCACTCTATGAGCAGAAGCCTGAAGAACCACCTGCTCCAGTTTCATCCTCAACGAGCAATTTGTCTGCTGGGCCATCTCTGACATCTCGGTTTGAGTATGTAGAAAATGTCCAATCATCTGAGTTGAATTCTGGAGGTTCACATGTAATTAGTCATGTGACTCCACCAAAGTCATCAAGCTTCTTTGCGGACTTCGGAATGGATGGTGGCTTTTCAAAGAAATCTGGGCCAAGCTCCTCAAAAGTGCAAATTCAGGAATCTGATGAAGCAAGAAAGAAGTTCTCGAATGCTAAATCTATTTCTTCATCCCAATTTTTTGGAGATCAGAGCAAGGCTGCAGATGCGGATGCTCAAGTTACTTTGTCAAAGTTTTCGGGTTCAAATGCCATCTCCAGTGCTGATCTTTTTGGTGACTCAAGAGATAACTCCATTGATCTAACTGCTAGTGACCTCATCAATCGTTTATCTTTCCAGGCACAACAGGATCTCTCTTCACTTAAGAACATTGCAGGAGAGACTGGGAAGAAGCTCAGCTCGTTGGCCTCAACATTGATGACAGATCTTCAGGACCGAATCCTCTAA 1212 0.4472 MASEGFTDKNTVFRKLKAKSENKMCFECNAKNPTWASVTYGIFICIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKMMSFGGNNRAQVFFKQHGWTEGGKIEAKYTSRAAELYRQILSKEVAKSMAEDGGSLPSSPVASQSSHGANGLPEVRTHEVPKENSLEKPENPESTSPRALHTIVSSTVKKPIGAKKTGKSGGLGARKLTKKPSESLYEQKPEEPPAPVSSSTSNLSAGPSLTSRFEYVENVQSSELNSGGSHVISHVTPPKSSSFFADFGMDGGFSKKSGPSSSKVQIQESDEARKKFSNAKSISSSQFFGDQSKAADADAQVTLSKFSGSNAISSADLFGDSRDNSIDLTASDLINRLSFQAQQDLSSLKNIAGETGKKLSSLASTLMTDLQDRIL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0668 403 MobiDBLite consensus disorder prediction 133 147 - -
Apr3g0668 403 MobiDBLite consensus disorder prediction 126 234 - -
Apr3g0668 403 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 403 - -
Apr3g0668 403 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 403 - -
Apr3g0668 403 SUPERFAMILY ArfGap/RecO-like zinc finger 11 125 IPR037278 -
Apr3g0668 403 CDD ArfGap_ArfGap2_3_like 8 123 - -
Apr3g0668 403 Gene3D Arf GTPase activating protein 2 139 IPR038508 -
Apr3g0668 403 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Apr3g0668 403 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Apr3g0668 403 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Apr3g0668 403 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Apr3g0668 403 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Apr3g0668 403 Pfam Putative GTPase activating protein for Arf 11 107 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0668 Apr-Chr3 17160512 17167345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0668 13 91 C2H2 Transcription Factor Family AT4G21160 46.250 1.92e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0668 K12493 K11855 gmx:100785169 711.064