Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0667 ATGACGGAATACCGGTCGCCGCCGACGATGAATTTGTGGACCGACGACAACTCCTCCGTGATGGAGGCTTTCATGAGCTCCTCCGACCTCTCCTCGCTAGCTCCGCCTCCACCGCCGACGCCGACGCAGTCGCAGCCTCTGTTCAACCAGGAGACTCTTCAACAGCGGTTGCACGCGCTAATTGAAGGTGCGAGAGAGAGCTGGACATACGCCATCTTCTGGCAATCCTCTTATGACTACTCTGGCGCTTCTCTCCTTGGTTGGGGCGATGGCTATTACAAAGGCGAGGAGGACAAAGGAAAAGGCAAAGCTACCAAAACGACGTCGTCTGCGGAACAGGACCACCGCAAAAAGGTTCTCCGTGAACTCAATTCCTTAATTTCTGGTCCTTCTGCCTCTGGCGACGATGCGGTGGACGAAGAAGTCACCGACACTGAATGGTTCTTTCTGGTGTCAATGACTCAGTCCTTCGTCAACGGTAGTGGGTTACCGGGCCAGGCTTTCTTCAATTCCAGCCCGGTTTGGGTCACTGGAGCGGACCGGTTGTCCGGTTCGGCCTGCGAGCGGGCCCGCCAGGGTCAGGTGTTTGGGCTGCAGACTCTGGTTTGCATACCCTCTGCAAACGGCGTCGTTGAGTTGGCTTCCACTGAAGTTATTTTCCAGAACGCTGATCTGATGAACAAGGTGCGCGTTTTGTTCAACTTCAACAACCTGGATGCCGGTTCGTGGCCATTGAATTCCGTTACAACGGATCAGGGGGAGAACGACCCGTCCTCTCTCTGGCTCAGCGATCCCTCTGGGATTGAAATAAGAGATTCTGCTGCTAACACCGTTGCGCCAGATTCGGCCAATACTGGGACAGTTAGCAAGACGTTGCAGTTTGAAACCCCTGGTTCCAGTACTCTAACCGAGGCCCCAAGTGCTGTTCATGTTCCCAACTCTCACCAGCAGCAATCCGGCGAGATTCTTAGCTTCGGGGAGAGCAAGAAGAACTCTTACAATGGGAATTTCTTTCCCAGCGTTGTTGCTGAGGAGAACAAGAAGAGAAGGTCCCCTGTTTCTAGGAGCAGCATTGATGACGGAATGCTCTCCTTCACTTCCGGTGTGATCTTACCGTCTTCGAATTTGAAGTCCGGTGGTGGTGGTGGTGGTGATTCCGATCATTCCGATCTTGAAGCATCTGTGGTTAAAGAGGCTGACAGCAGCAGAGTGGTGGAGCCGGAGAAACGGCCTCGGAAAAGGGGGCGAAAGCCGGCAAATGGTAGAGAGGAACCTTTGAATCACGTGGAAGCGGAGAGGCAGAGGAGAGAAAAGCTGAATCAGAGGTTCTATGCACTTCGTGCTGTTGTTCCTAATGTGTCGAAGATGGACAAGGCATCGCTTCTTGGCGATGCCATATCTTACATAAACGAGCTGAAGTCAAAGCTTCATGGACTGGAATCGGAGAAAGGTGAATTGGAGAAGCAATTGGATTCAACGAAAAAGGAACTTGAGCTGGCAAGTAAACACCCTCCCCCTCCACCACCATCTGATATAGAAGCAAAGAAGATGACAACCAAGCTGGTTGATTTGGATATAGACGTGAAAATCATAGGTTGGGATGCTATGATTAGGATCCAATGCAGCAAGAAGAACCACCCTGCTGCCAGGTTGATGGCAGCTTTGAAGGACTTGGACCTGGAAGTACATCATGCCAGTGTGTCCGTGGTGAATGATTTGATGATCCAACAAGCCACGGTGAACATGGGAAATCGGTTTTACACGCAGGAGCAGCTCCTGTTAGCGCTGTCATCCAAAGTTGGCGATGCACGGTAA 1815 0.5196 MTEYRSPPTMNLWTDDNSSVMEAFMSSSDLSSLAPPPPPTPTQSQPLFNQETLQQRLHALIEGARESWTYAIFWQSSYDYSGASLLGWGDGYYKGEEDKGKGKATKTTSSAEQDHRKKVLRELNSLISGPSASGDDAVDEEVTDTEWFFLVSMTQSFVNGSGLPGQAFFNSSPVWVTGADRLSGSACERARQGQVFGLQTLVCIPSANGVVELASTEVIFQNADLMNKVRVLFNFNNLDAGSWPLNSVTTDQGENDPSSLWLSDPSGIEIRDSAANTVAPDSANTGTVSKTLQFETPGSSTLTEAPSAVHVPNSHQQQSGEILSFGESKKNSYNGNFFPSVVAEENKKRRSPVSRSSIDDGMLSFTSGVILPSSNLKSGGGGGGDSDHSDLEASVVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLHGLESEKGELEKQLDSTKKELELASKHPPPPPPSDIEAKKMTTKLVDLDIDVKIIGWDAMIRIQCSKKNHPAARLMAALKDLDLEVHHASVSVVNDLMIQQATVNMGNRFYTQEQLLLALSSKVGDAR* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0667 604 CDD bHLH_AtAIB_like 420 496 - -
Apr3g0667 604 MobiDBLite consensus disorder prediction 390 433 - -
Apr3g0667 604 Gene3D - 415 502 IPR036638 GO:0046983
Apr3g0667 604 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 426 493 IPR036638 GO:0046983
Apr3g0667 604 MobiDBLite consensus disorder prediction 96 115 - -
Apr3g0667 604 SMART finulus 429 478 IPR011598 GO:0046983
Apr3g0667 604 PANTHER MYC 40 601 IPR045084 GO:0003700|GO:0006355
Apr3g0667 604 MobiDBLite consensus disorder prediction 295 319 - -
Apr3g0667 604 Pfam Helix-loop-helix DNA-binding domain 427 472 IPR011598 GO:0046983
Apr3g0667 604 MobiDBLite consensus disorder prediction 374 433 - -
Apr3g0667 604 PANTHER TRANSCRIPTION FACTOR MYC2 40 601 - -
Apr3g0667 604 Coils Coil 469 503 - -
Apr3g0667 604 MobiDBLite consensus disorder prediction 25 46 - -
Apr3g0667 604 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 53 233 IPR025610 -
Apr3g0667 604 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 423 472 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0667 Apr-Chr3 17078468 17080995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0667 1 601 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 57.099 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr3g0667 bHLH-MYC_N 5.8e-55 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0667 K13422 - gmx:100790854 848.195