Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0662 ATGGGAGATGTGGCTAAGGACCTTACAGCTGGGACTGTCGGAGGGGCAGCACAGTTGATATGTGGACACCCCTTTGACACCATCAAGGTGAAGCTCCAAAGCCAGCCTGCTCCACTCCCTGGTCAGCCTCCCAAATATTCAGGCGCATTTGATGCTGTCAAGCAGACATTAGCAGCTGAAGGTCCGAGGGGCTTATACAAAGGTATGGGTGCTCCACTTGCTACAGTAGCAGCCTTCAATGCTGTCCTGTTTACAGTGAGGGGACAGATGGAAACAATAGTGAGGTCCCATCCTGGTGCCCCCCTCACAGTGAATCAACAGGTAGTTTGTGGAGCTGGAGCTGGAGTCGCTGTTTCCATTCTTGCTTGCCCAACTGAATTGATCAAATGCAGGTTGCAAGCACAAAGTGCCCTTGCTGGCTCTGAAACAGCTACTGTGGCTGTTAAGTATGGAGGACCCATGGATGTGGCCAGGCACGTTCTCAGGTCTGAAGGGGGCATGAGAGGTCTTTTGAAGGGCTTGGTTCCCACTATGGGGCGTGAGATACCTGGAAATGCTATAATGTTTGGTGTATATGAAGCATTAAAGCAAAGGTTTGCAGGAGGCACCGATACTTCTGGCCTTAGTAGAGGTTCTCTGATTATTGCTGGAGGCTTGGCTGGAGCTTCCTTTTGGTTCGTTGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAGTAGATGATTACAGAAACCCAAAGTTCTCTGGTTCATTTGATGCTTTCAGAAAGATTAGAGCTTCAGAGGGGTTCAAAGGCTTGTATAAGGGTTTTGGTCCTGCAATGGCCCGAAGTGTTCCAGCAAATGCTGCATGCTTCTTGGCATATGAAGTGACAAGATCAGCTCTGGAATGA 894 0.4877 MGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYSGAFDAVKQTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMETIVRSHPGAPLTVNQQVVCGAGAGVAVSILACPTELIKCRLQAQSALAGSETATVAVKYGGPMDVARHVLRSEGGMRGLLKGLVPTMGREIPGNAIMFGVYEALKQRFAGGTDTSGLSRGSLIIAGGLAGASFWFVVYPTDVIKSVIQVDDYRNPKFSGSFDAFRKIRASEGFKGLYKGFGPAMARSVPANAACFLAYEVTRSALE* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0662 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Apr3g0662 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Apr3g0662 297 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Apr3g0662 297 Pfam Mitochondrial carrier protein 102 199 IPR018108 -
Apr3g0662 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Apr3g0662 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 296 - -
Apr3g0662 297 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Apr3g0662 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Apr3g0662 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Apr3g0662 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0662 Apr-Chr3 16870556 16874679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0662 22 296 Antiporters AT1G79900 33.808 3.95e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0662 K15109 - gmx:100791908 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0662 3 16870556 16874679 Apr3g0662 3 16870556 16874679 ECH