Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0651 ATGGCTACCACTTTATGTTCTTCATACGTGCTTCTATTGTTATTCTCAACTTTCCTTCTCATAAGTTTCCATGCCAATTCAATTTACTTCCAAATTCCTCTTTTCAATTCTAATGATTCCAACATAACCTATCAAGGATCTGCAGCGCCGCGTGATGGAGGAGTTGCATTTAACGTCAATGACAATTATCTATATCAAGTTGGATGGGCCACTTATGCTAAAAGGGTGTTACTATGGGAGTCAACCACAGGTCAACTCACTGATTTCACAACTCATTACACCTTCTTTATTGACACTCAGGATCAACCTGCCTTTAAGTATGGTGACGGACTTGCCTTCTTCCTAGCTCCTGTTGACATTGAAATCCCACCCAATTCTGCAGGTGGGTTTCTTGGCCTTTTCAACTCTACAACTAAGAATTCAACTAAAAACCAAATTGTTCTAGTGGAATTTGATTCTTACCCAAATTCTGAATGGGGTGAGACTGTGCAGCATGTGGGAATCAATAGTAATTCAATCATTTCATCAGTGTGGACTCGTTGGAATGCTAGTCAACATAGTGGTGACACTGCTGACGTTTGGATAAGCTACAGTTCCACAGCCAAGAATTTGAGTGTATCTTGGAAATACGGAAGCACCTCTGATCCTCAAGAGAAAACTACTCTATCATATCCAATTGATTTGATGAAGGTTTTGCCTGAATGGGTTACGATTGGATTTTCTGCAGCAACAGGTCTATTTGAAGAAAGTCATAATCTTTTATCATGGGAGTTTAATTCCACTTTGGAAGGCAAAGGTGGGAATAACACAAGTAAGACAAGATTAGTTATGATTCTAACTATCTGTTGTGGTGTTATAGTAGTGGGAATAATTGGAGCAGGTGGATTCCTTTGGAGGAGGCAAAAGAAAAGCAAAAAGGAAGCGGCTATGAATTTAACCTCAATCAATGATGACCTTGAAAGAGGAACAGGGCCAAGAAGGTTCTCTCATAGGGAGCTTGCTTTGGCTACAAACAAATTTTCGAGTGACAGAAAGTTAGGTCAAGGTGGGTTTGGAGCTGGTTTTAAAGGTTATTTTGCTGACATAGATTTAGCAGTTGCTGTGAAGAAAATATCAAGGGGCTCCAGACAAGGGAAGAAAGAGTATGTAACTGAGGTCAAAGTGATTAGTCAATTGAGACACAGAAATCTTGTGCAACTCATAGGTTGGTGCCATGACAAAGGTGAGTTTCTGCTTGTTTATGAGTTCATGCCAAATGGTAGCCTTGACACTCATTTATTTGGTAGAAGGACACCTCTTCGTTGGAGTGTGAGGCACAAGATAGCTCTTGGATTGGCCTCTGCTTTGCTTTATCTGCATGAAGAATGGGAAAGATGTGTGGTTCATAGGGATATTAAATCAAGCAATGTTATGTTAGATTCTAATTTCAAAGTCAAGCTTGGTGACTTTGGGCTGGCTAGGCTCATGGACCATGAACTTGGACCTGAAACAACAGGGTTAGCTGGAACCTTCGGATATTTGGCTCCAGAATATGTGAGTACAGGCAGGGCCAGCAAAGAGTCAGATGTGTATAGTTTTGGGGTGGTTGCTTTGGAGATTGCTACGGGAAAGAAAGCTGTTGATATTATAAAGGATAAAGATGAAGAAAAGGGTTTTCTTGAGTGGGTTTGGAATTGTTATGGCAAAGGGGAGGTGCTTATGGCCATGGATGAGAGATTGCAAAATGATTTTGATGATAAACAAGTGGAGTGTTTGATGATGGTGGGACTGTGGTGTGCTCACCCTGATATGAATTTGAGACCATCAATAAGACATGCAATTCAAGTGCTTAATTTTGAGGCTGATATGCCAAACCTTCCATCAAAAAGACCTGTTGCAACATATAATGCTCCTACATCGCCCCCAACTTCAGGAGCAGATTCCATAACAAGAAGCCTTCAAATTGGTCGTTGA 1953 0.4076 MATTLCSSYVLLLLFSTFLLISFHANSIYFQIPLFNSNDSNITYQGSAAPRDGGVAFNVNDNYLYQVGWATYAKRVLLWESTTGQLTDFTTHYTFFIDTQDQPAFKYGDGLAFFLAPVDIEIPPNSAGGFLGLFNSTTKNSTKNQIVLVEFDSYPNSEWGETVQHVGINSNSIISSVWTRWNASQHSGDTADVWISYSSTAKNLSVSWKYGSTSDPQEKTTLSYPIDLMKVLPEWVTIGFSAATGLFEESHNLLSWEFNSTLEGKGGNNTSKTRLVMILTICCGVIVVGIIGAGGFLWRRQKKSKKEAAMNLTSINDDLERGTGPRRFSHRELALATNKFSSDRKLGQGGFGAGFKGYFADIDLAVAVKKISRGSRQGKKEYVTEVKVISQLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDTHLFGRRTPLRWSVRHKIALGLASALLYLHEEWERCVVHRDIKSSNVMLDSNFKVKLGDFGLARLMDHELGPETTGLAGTFGYLAPEYVSTGRASKESDVYSFGVVALEIATGKKAVDIIKDKDEEKGFLEWVWNCYGKGEVLMAMDERLQNDFDDKQVECLMMVGLWCAHPDMNLRPSIRHAIQVLNFEADMPNLPSKRPVATYNAPTSPPTSGADSITRSLQIGR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0651 650 Pfam Legume lectin domain 29 271 IPR001220 GO:0030246
Apr3g0651 650 Pfam Protein kinase domain 341 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0651 650 ProSiteProfiles Protein kinase domain profile. 340 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0651 650 Gene3D Transferase(Phosphotransferase) domain 1 417 632 - -
Apr3g0651 650 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
Apr3g0651 650 CDD lectin_legume_LecRK_Arcelin_ConA 28 262 IPR001220 GO:0030246
Apr3g0651 650 SUPERFAMILY Protein kinase-like (PK-like) 324 624 IPR011009 -
Apr3g0651 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Apr3g0651 650 Gene3D - 25 265 - -
Apr3g0651 650 PANTHER - 19 649 - -
Apr3g0651 650 PANTHER PUTATIVE-RELATED 19 649 - -
Apr3g0651 650 SMART serkin_6 340 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0651 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 268 IPR013320 -
Apr3g0651 650 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Apr3g0651 650 CDD STKc_IRAK 346 611 - -
Apr3g0651 650 MobiDBLite consensus disorder prediction 625 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0651 Apr-Chr3 16552236 16554333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0651 12 629 Receptor kinase-like Gene Family AT5G10530 59.200 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr3g0651 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0651 - - jre:108982580 842.417