Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0645 ATGGCACCCTCTTTCGATCAAAGTGCTAACACAGTTTGCGTTATGGACGCTTCGGGCCAATTAGGAACCAGTCTTGTCCAGCGACTACTTCAAAGGGGATACACCGTCCATGCCTCTGCTCAATCCCATGGAATAGAGCAATTCAATGGGATTTCTGCTGACCCCAATAAACTCAAGATTTTTCGTTCCGACCCTTTTGATTACCATAGCATAACGGATGCTCTTAGAGGTTGCTCTGGTTTGTTCTATACATTTGAACCACCTCAAGACCAACCCAACTATGATGAATACATCGCAGACGTAGAAGTCAGAGCTGCGCACAATGTGCTTGAAGCTTGTGCTCAAACAGAAACTATAGATAAAGTGGTTTTCACTTCCTCCGCAACTGCTGTTGTTTGGAGAGAGGATCGCAAGTCCATGGAATCGGACTTAGATGAAAGACATTGGAGTGATGCAAATTTGTGTCGTAAGTTCAAGTTATGGCACGGGATGTCAAAGACGCTGGCGGAGAGGACAGCGTGGGCCCTAGCAATGGACAGGGGAGTGACCATGGTGTCCATCAACGCAGGGTTATTGATGGGTCACGATGATCTCTTCTGCGTCAAGAACCCGTACCTCAGAGGAGCTGCGGAAATGTACGAAGATGGTGTCTTAGTTACCGTAGATTTAGGAATCTTAGTGGACACCCACATTTGTGTCTACGAAGATGTCTCCTCCTACGGTCGTTACTTGTGCTTCAACCACGTCATCAACACCCACGACGACGCCGTTCGCCTCGCCCGCAAGTCCCTGCCCACACCTCCTTCCATGCCTCTAAGCTGTGACCAAGGGAAGTCTCTTATCCAGCAAAGAATAAGCAACAAGAAATTGAACAAACTAATGGTGAATTTTGCGGGTTGA 900 0.4767 MAPSFDQSANTVCVMDASGQLGTSLVQRLLQRGYTVHASAQSHGIEQFNGISADPNKLKIFRSDPFDYHSITDALRGCSGLFYTFEPPQDQPNYDEYIADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKSMESDLDERHWSDANLCRKFKLWHGMSKTLAERTAWALAMDRGVTMVSINAGLLMGHDDLFCVKNPYLRGAAEMYEDGVLVTVDLGILVDTHICVYEDVSSYGRYLCFNHVINTHDDAVRLARKSLPTPPSMPLSCDQGKSLIQQRISNKKLNKLMVNFAG* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0645 299 Gene3D - 4 299 - -
Apr3g0645 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 269 IPR036291 -
Apr3g0645 299 Coils Coil 298 299 - -
Apr3g0645 299 Pfam NAD(P)H-binding 17 131 IPR016040 -
Apr3g0645 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 297 - -
Apr3g0645 299 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 6 297 - -
Apr3g0645 299 CDD FR_SDR_e 12 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0645 Apr-Chr3 16381163 16384951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0645 11 297 Monolignol Biosynthesis Gene Families AT5G58490 32.476 1.55e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0645 - - gmx:100783579 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0645 3 16381163 16384951 Apr3g0645 3 16381163 16384951 ECH