Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0631 ATGGAGCCATTTCCAGCACAGTCAGATTTGTCTTTGCAAATCAGCCCTCCAAACAGAAAAGCAACACAAAGTTGGAAGAGAAGCACAGAAGAAGAGATGAATTTGGAGTTCTGGAAGAGAGCGTTGGAGTCAAGAAACTCCTTAGTTAAAACAGACCTCTCTCTGTCCAATTCCAGGGTTTCTTCAAACACAAACACTACCCCAAACTCCAACTTCATCTACCACTTCCAAAACTGCAACAACAGTGCCAACCTCTTCCAATTATTTCAACAAAATCACTACTTTCACCACCAGTCACTCTTCCAGCACCAAAGCCTTAGCCAAGAGCTAGGTTTTCTAAGACCCATAAGAGGGACCCCAGTATATCAAAACCCACCTCCTATCTCGTTTACGCAACACCCCCTAGATGCTGCTTCCAACACAACAATGGCTTCAAACCTTTTTCATAATTCTCAAACTGTGATGCGCTCAAGGTTCCCATCACGCTTTCCTAGCAAGCGTAACATGAGGGCTCCTCGGATGCGCTGGACTACTACACTCCACGCTCGCTTTGTTCATGCCGTTCAGCTTTTGGGTGGTCATGAAAGGGCTACACCAAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTCACTTTAGCTCATGTTAAATCTCATTTGCAGATGTACCGGACGGTTAAAACTACAGATAGAGCTGCGGCATCATCAGGGCAATCAGACATATATGATAATGGCTCATCTGGAGATACTTCTGAAGACTTCATGTTTGATATAAACTCCCCAGAAAGATCTGATCTATCTGTTAAGCAGGCAAGTGCAAGAGCTAATCAAGACAAGGAAAATCGTGACCTGTGGAGCAACTCTTCCAGGGAAGCTTGGTTAAATGGCAAGCCAAAGGTCGATTCTATTCAAAACGTGTCTGCTATCGAGAAGGGAATGGACCAAAAGTGTCTAAGCAATGAAAGAATATCAGATGGAAGCTCATCCTCAAATTCAGGATCAAGCCCCAAGAAGCCAAATTTGGATTTAGAGTTCACCTTGGGCACATTGAAACATATATCATAA 1065 0.4347 MEPFPAQSDLSLQISPPNRKATQSWKRSTEEEMNLEFWKRALESRNSLVKTDLSLSNSRVSSNTNTTPNSNFIYHFQNCNNSANLFQLFQQNHYFHHQSLFQHQSLSQELGFLRPIRGTPVYQNPPPISFTQHPLDAASNTTMASNLFHNSQTVMRSRFPSRFPSKRNMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDIYDNGSSGDTSEDFMFDINSPERSDLSVKQASARANQDKENRDLWSNSSREAWLNGKPKVDSIQNVSAIEKGMDQKCLSNERISDGSSSSNSGSSPKKPNLDLEFTLGTLKHIS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0631 354 MobiDBLite consensus disorder prediction 230 254 - -
Apr3g0631 354 Pfam Myb-like DNA-binding domain 173 224 IPR001005 -
Apr3g0631 354 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 348 - -
Apr3g0631 354 MobiDBLite consensus disorder prediction 8 23 - -
Apr3g0631 354 MobiDBLite consensus disorder prediction 320 339 - -
Apr3g0631 354 MobiDBLite consensus disorder prediction 270 290 - -
Apr3g0631 354 MobiDBLite consensus disorder prediction 1 27 - -
Apr3g0631 354 MobiDBLite consensus disorder prediction 318 345 - -
Apr3g0631 354 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 172 225 IPR006447 GO:0003677
Apr3g0631 354 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 348 IPR044847 GO:0000976|GO:0006355|GO:0010158
Apr3g0631 354 SUPERFAMILY Homeodomain-like 169 225 IPR009057 -
Apr3g0631 354 Gene3D - 171 228 - -
Apr3g0631 354 MobiDBLite consensus disorder prediction 230 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0631 Apr-Chr3 15857907 15862969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0631 104 349 G2-like Transcription Factor Family AT4G17695 45.926 1.65e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr3g0631 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0631 - - aprc:113868756 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0631 3 15857907 15862969 Apr3g0631 3 15857907 15862969 ECH
Apr7g1776 7 25081488 25086621 Apr3g0631 3 15857907 15862969 PCT