Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0607 ATGAGTTTAAAGTCACAAATTCCATCAAATTTGACATTCATCTTTTCCAACATGAACAATCCTATAGATGAAAGGGAGCAGTGCCAAAAGAAGAGGAAATCTACCATCTGTGAAGCCTCGACTTTGAGGACTTCAAGGAGAAGATTCTACAACAACAAAAATGAAGAAGAGAGGAATAAAGGAGTCTCAACCACACTAAAGCTTTATGATGACCCATGGAAGATCAAGAAGACACTAACTGATAGTGATCTGGGAATCCTGAGCAGACTCTTGTTGGCTGCAGATTTGGTCAAAAAACAAATTTTGCCTATGCTGAGTGTAGATCATGCAAGGGCTGCAGAGACTGAGGAAGGAACCCCGGTTAAAGTTTGGGACATGGACACCAAATCCATGCACCAACTTGTTCTAAAGCGGTGGTCTTCATCCAAGAGCTATGTTCTTATTGGAAAGTGGAACCAGGATTTCGTGAGAAGAAGAGATCTGAAGAAAGGGGATGAGATCGGATTTCACTGGGATCCATATAACTGTGCTTTCAATTTCTGTGTTCTCAAACGAGCCGTTCCGGAGAATTAA 573 0.4154 MSLKSQIPSNLTFIFSNMNNPIDEREQCQKKRKSTICEASTLRTSRRRFYNNKNEEERNKGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLSVDHARAAETEEGTPVKVWDMDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGDEIGFHWDPYNCAFNFCVLKRAVPEN* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0607 190 Gene3D - 72 186 IPR015300 -
Apr3g0607 190 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 185 - -
Apr3g0607 190 SUPERFAMILY DNA-binding pseudobarrel domain 71 183 IPR015300 -
Apr3g0607 190 CDD B3_DNA 73 184 IPR003340 GO:0003677
Apr3g0607 190 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0607 Apr-Chr3 14091867 14092530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0607 39 169 B3 DNA Binding Superfamily AT1G25560 27.737 2.63e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0607 - - gmx:102667341 349.747