Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0594 ATGGGTGGTCATAGAAGGAAGAGGCACCACTTTAGTAGAATCCATGCATTTTCTTGTGGGAAAGCTTCATTCAAAGGAGAGCATTCACTTATAGGGGGTCCTGGCTTTTCAAGGATAGTGTACTGCAATGAACCAGAACGTGGTGAGGGGAGTGTTCTCAGTTATGGTGACAATTATGTGAGTACAACCAAATACACAGTGGCTACTTTCCTCCCCAAGTCCTTGTTTGAGCAATTCAGGAGGGTTGCCAATTTTTACTTCCTTGTCTGTGCAATCTTGTCTTTTTTCCCCGTCGCTCCTTACTCGGCAGTCAGCAATGTTGTTCCTCTTGTGGTTGTGGTTGCTGCCACTATGGGGAAAGAGGCTGTTGAGGATTGGAGGAGGAAAAAGCAGGATATCGAGATGAATAACAGAAAGGTTAAAGTGCACGACGGAGAAGGTGTTTTTGACTATTCTAAATGGAAGGATTTGAAAGTTGGAGACATAATAAAGGTTGAAAAGGATGGATTTTTCCCTGCAGATCTCATCTTACTTTCATCTAACTATGACGATGCAATTTGCTATGTTGAGACAATGAATCTTGATGGAGAAACAAATCTTAAAGTTAAGCAAGCACTGGAAGAAACATCAAAGTTGCAAGAAGACTTAAGATTTCAAAATTTCAAGGCTATAATCAAATGCGAAGATCCAAATGCGAATTTGTACTCATTTGTAGGCAATTTGGAGATTGAAGATCAATTGTATCCTCTTGCACCTCAGCAGCTATTGCTAAGGGACTCAAAGCTGAGGAACACAGATTTTGTCTATGGTGTGGTAATCTTTACTGGCCATGATACAAAGGTTATGCAGAATTCCACAGACCCTCCATCCAAGAGAAGCACAGTTGAGAAACGGATGGATACGATCATCTACTTTCTGTTCTTTGTCTTATTTTTTATTTCTTTTATTGGTTCAATTTTTTTCGGAATTGCAACCAGGGAGGACCTTGAAAATGGAGTCATGAAAAGATGGTACCTTAGGCCAGACGATACAACAGTTTACTTTGATCCAAAGAAAGCACCAATTGCAGCAATTCTGCACTTCTTGACTGCGCTTATGTTGTATAGTTACTTTATTCCAATTTCTTTGTATGTTTCCATTGAAATTGTGAAAGTTCTTCAAAGCATTTTCATCAACCAAGATGTGCAGATGTATTATGAGGAAACTGACCGGCCAGCACATGCTCGTACCTCAAATTTGAATGAAGAACTTGGCCAAGTTGATACTATACTTTCAGATAAAACAGGAACTTTGACTTGTAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGATTGCATATGGACGAGGAATAACAGAAGTTGAGAAAGCTCTAGCCAAGGGAAAAGGATTACCTTTGAGTCAAGAGTTGACGGAAGATGGCAATGTTGCCAAGATTTCTGTAGCAACTTCATCCATTAAAGGTTTTAACTTTATGGATGAAAGGATCATGAATGGAAATTGGATCAATGAACCTCAAGCCAATGTGATTCAAAAGTTCCTGCAGTTATTGGCAGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACTGGTAAAATTTCATACGAAGCTGAGTCACCCGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAACTTGGGTTTGAGTTCTATGAAAGGACTCAGACTACTATTTCAATGCGTGAGTTCAATCCCAAATCAAACAAGATTAGTGAAAGGTCATACAATCTTCTGAATATTTTAGAGTTTAGCAGTACAAGAAAGAGGATGTCTGTAATTGTAAGAGATGAGGATGGGAAACTACTACTGCTTAGCAAAGGAGCTGACAGTGTCATGTTTGAACGACTTGCAAATAATGGAAGGGAATTTGAAGAGAAGACTAAGCAGCACATTGAGGAATATGCTAATGCTGGTTTGAGGACCTTGATACTTGCATATCGAGAACTTGATGAAGAAGTGTACAATCTATTTAATAAAGAATTCATGGAGGCCAAGAACTTAGTGAGTGCGGATCGGGATAATATTGTGGAGGAAATATCAGAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCTGTTGAAGACAAACTTCAAAATGGGGTTCCCGAATGCATTGACAAGCTAGCACAGGCAGGAATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGGTTTGCCTGTAGCTTACTCAGACAAGGAATGAAGCAAATTATAATTACTTCAGACACCCCAGAAACCAAATCACTGGAGAAAATCGAGGACAAGTCTGCTGCCGCAGAGGCATTTAAGGCAAGTGTTCTTCGTCAGTTAAGGGAAGGAAAGACATTACTTTCGGAATCTAATGAAAACTCTGAGGCATTAGCTCTTATCATTGATGGGAAGTCTCTCACTTATGCACTAGAAGATGATGTAAAGGACCTGTTTCTTGCACTTTCCATTGGTTGCGCATCTGTTATTTGCTGTCGTTCATCTCCGAAGCAGAAAGCACTTGTTACTAGACTAGTAAAGATTAAAACCGGTAATACAACTCTAGCAATTGGTGATGGAGCAAATGATGTTGGAATGCTCCAAGAAGCTGACATTGGGATTGGTATCGGTGGTGTTGAAGGAATGCAGGCTGTTATGTCAAGTGATATTGCAATTGCCCAATTCCGGTTTCTTGAGCGTTTACTTCTTGTGCATGGGCATTGGTGTTACAGAAGAATCTCATCAATGATCTGCTACTTCTTTTACAAAAACATTGTCTTTGGCTTCACCCTGTTCTTCTATGAGATCTACGCCTCAGTCTCGGGTCAAGCTGCATACAATGATTGGTTCCTGTCACTATATAATGTATTCTTCACGTCTCTTCCTGTAATTGCCTTGGGAGTGTTTGACCAGGATGTCTCGGCTAGATTATGTATCAAGTTCCCATTACTATATCAAGAAGGAGTACAAAATGTGTTATTTACCTGGAAACGGATCCTTGGTTGGGCATTCAATGGAATTTTGAGTGCTACTATAATATTCTTCTTCTGCATCAAGGCAATGGAGCATCAAGCGTTCCGTAAAGGAGGGGAAGTTGTTGGGCTGGATGTTCTTGGTGCCACCATGTACACTTGTGTTGTGTGGGTGGTGAATTTCCAAATGGCATTATCTATTAGTTACTTCACTTACATACAACATATACTCATATGGGGTGGCATTCTTTTATGGTATATTTTCCTCCTAGTATATGGAACCGTGGACCCCTACCTATCAACCACTGCCTACAAAGTCTTAATTGAAGCTTGTGCACCAGCACCATCTTATTGGCTTATCACTTTGCTTGTGCTTATCGCTTCACTCCTTCCATATTTTGCCTATGCTTCGATTCAAATGCGCTTCTTCCCTATGTTCCATCAAATGATACAGTGGATAAGAAATGATGGGCAAACAACCGATCCAGAATACGTTAATATTGTGAGGCAGAGATCAATAAGACACACAACAGTTGGGTTCACAGCTCGTTTTGAAGCATCCCAAAGCTCGAAAGCATCCAAGAGTTTTCAAGTCTGA 3585 0.4011 MGGHRRKRHHFSRIHAFSCGKASFKGEHSLIGGPGFSRIVYCNEPERGEGSVLSYGDNYVSTTKYTVATFLPKSLFEQFRRVANFYFLVCAILSFFPVAPYSAVSNVVPLVVVVAATMGKEAVEDWRRKKQDIEMNNRKVKVHDGEGVFDYSKWKDLKVGDIIKVEKDGFFPADLILLSSNYDDAICYVETMNLDGETNLKVKQALEETSKLQEDLRFQNFKAIIKCEDPNANLYSFVGNLEIEDQLYPLAPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNSTDPPSKRSTVEKRMDTIIYFLFFVLFFISFIGSIFFGIATREDLENGVMKRWYLRPDDTTVYFDPKKAPIAAILHFLTALMLYSYFIPISLYVSIEIVKVLQSIFINQDVQMYYEETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGIAYGRGITEVEKALAKGKGLPLSQELTEDGNVAKISVATSSIKGFNFMDERIMNGNWINEPQANVIQKFLQLLAVCHTAIPEVDEETGKISYEAESPDEAAFVIAARELGFEFYERTQTTISMREFNPKSNKISERSYNLLNILEFSSTRKRMSVIVRDEDGKLLLLSKGADSVMFERLANNGREFEEKTKQHIEEYANAGLRTLILAYRELDEEVYNLFNKEFMEAKNLVSADRDNIVEEISENIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIITSDTPETKSLEKIEDKSAAAEAFKASVLRQLREGKTLLSESNENSEALALIIDGKSLTYALEDDVKDLFLALSIGCASVICCRSSPKQKALVTRLVKIKTGNTTLAIGDGANDVGMLQEADIGIGIGGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTLFFYEIYASVSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARLCIKFPLLYQEGVQNVLFTWKRILGWAFNGILSATIIFFFCIKAMEHQAFRKGGEVVGLDVLGATMYTCVVWVVNFQMALSISYFTYIQHILIWGGILLWYIFLLVYGTVDPYLSTTAYKVLIEACAPAPSYWLITLLVLIASLLPYFAYASIQMRFFPMFHQMIQWIRNDGQTTDPEYVNIVRQRSIRHTTVGFTARFEASQSSKASKSFQV* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0594 1194 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Apr3g0594 1194 PRINTS P-type cation-transporting ATPase superfamily signature 748 758 - -
Apr3g0594 1194 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Apr3g0594 1194 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1186 - -
Apr3g0594 1194 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Apr3g0594 1194 Gene3D - 113 286 - -
Apr3g0594 1194 Gene3D - 538 698 IPR023299 GO:0000166
Apr3g0594 1194 SFLD p-type atpase 406 913 IPR044492 -
Apr3g0594 1194 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Apr3g0594 1194 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 486 700 IPR023299 GO:0000166
Apr3g0594 1194 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr3g0594 1194 Pfam Cation transport ATPase (P-type) 529 623 - -
Apr3g0594 1194 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1140 IPR023298 -
Apr3g0594 1194 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 826 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr3g0594 1194 SFLD Haloacid Dehalogenase 406 913 - -
Apr3g0594 1194 SUPERFAMILY Calcium ATPase, transduction domain A 143 284 IPR008250 -
Apr3g0594 1194 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Apr3g0594 1194 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1186 - -
Apr3g0594 1194 Gene3D - 699 902 IPR023214 -
Apr3g0594 1194 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
Apr3g0594 1194 SUPERFAMILY HAD-like 419 917 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0594 Apr-Chr3 13224474 13231955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0594 10 1186 Primary Pumps ATPases AT1G68710 70.423 0.0 1798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0594 K01530 K14802 gmx:100797039 2089.69