Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0588 ATGTGCAACAACAATACTCCTTCTTCGGATATTCAAACAAGCTCCATTATGAAGAGGACACGAAAACCGACTATAAGATTTTCTTCTTCTTCCTCATCCTCTTCTCTCAAACCGCTGCGGCGGAGGAACAGGACCAAAACCAGAAAGCCCAAGTTCGTCAGTCTCCGTCTTAAACTATCTCAGCCCAAAAAGATGGCCCAGCCCAAGGCCCAACAGCAGCAGCTGAATCTCTTTCCTCTCCACCCGGAGGACAAGGACATGCACGAGGAGAACAACGTGGCCCTGCTGTTCAGCTCCGACGGGGGCGCCACGCTCACCGGGCTGCTGGAGGACGAGTCGACCACGACGACAGCGACCGCCACGTCGGAGGAGGGGTCGCTGTCGCCGATGACGTGTCCGGCGGTGGACGGGAACTGGTTGGTGAGGAAGGCGATGAGGAAGAGGGAGAGGGAGAGTGAAGAACGGTGGGTGTGTTACTCGGAGGTGGTGGAGGAGAAGAAGGAGACGATGGAGGAGGTGACTAGTTATTGTGATACTTTGGCTGGTGCGGGCACAACGACGTCGTTTGGCTTGTTGTCCTTGAAGTTGGATCACGAGGGGATATTGAATGCTTGGTCTGATAAAGGTTCTCTATACGTCGCAGACGAGGAGGCCCCACAGGCTGTCCCTGACTTGCTCAATGGTCTCCCTCTTCATAATGCCCTTGTTCCCAATGTTGCATGGGACAGTTGGGGGAGTGAAGCTGGGAACATATGGAAAGTTCCAGAAGATTGTGGAGCGAACAAGATGGTGAAGGAAGAAACGGGGGGTTGGAAGGTGGGGCAGAGAGAGGCAAGTGTGCAGAGATACAAGGAGAAGAGGCAAAGCAGGCTATTCTCCAAGAGGATCCGCTACGAAGTTCGAAAGCTCAACGCCGAGAAGCGGCCCAGAATGAAGGGACGATTTGTGAAGAGGGAATGA 960 0.5396 MCNNNTPSSDIQTSSIMKRTRKPTIRFSSSSSSSSLKPLRRRNRTKTRKPKFVSLRLKLSQPKKMAQPKAQQQQLNLFPLHPEDKDMHEENNVALLFSSDGGATLTGLLEDESTTTTATATSEEGSLSPMTCPAVDGNWLVRKAMRKRERESEERWVCYSEVVEEKKETMEEVTSYCDTLAGAGTTTSFGLLSLKLDHEGILNAWSDKGSLYVADEEAPQAVPDLLNGLPLHNALVPNVAWDSWGSEAGNIWKVPEDCGANKMVKEETGGWKVGQREASVQRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRE* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0588 319 MobiDBLite consensus disorder prediction 1 51 - -
Apr3g0588 319 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 33 319 - -
Apr3g0588 319 MobiDBLite consensus disorder prediction 1 38 - -
Apr3g0588 319 Pfam CCT motif 276 318 IPR010402 GO:0005515
Apr3g0588 319 ProSiteProfiles CCT domain profile. 276 318 IPR010402 GO:0005515
Apr3g0588 319 PANTHER CCT MOTIF FAMILY PROTEIN 33 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0588 Apr-Chr3 12849874 12854889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0588 192 318 C2C2-CO-like Transcription Factor Family AT1G73870 43.307 2.65e-21 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr3g0588 CCT 2.8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0588 - - gmx:100798231 395.971