Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0562 ATGGCTGTGCTTGGGAGTGGAGAATTGCTTGCGGCATTTCTTGTTTTCGTTATAATCTATTACTGGATACTCAACCGACGCACGCCCATCACTAAGTGGCCCGTGCTTGGGATGCTACCTGGTCTCTTCCTTAACAAGTCCAGCATCTATGATTATGTTACTTCAGTTCTGAAGGAACAAGGTGGTACTGCCATGTTTGAAGGACCTTGGCTATCAAACATGAACTTTTTCTGTACCAGTGACCCATTGAATGTACAACACATCACAAGCACAAAGTTTGAAAACTATGGGAAAGGGGATGATTTTGGCGAGATTTTTGAAATCCTGGGAGACGGGATTTTCAGGTCTGATTCCCTTTTATGGAAGTATAACAGAACCATACTTCATTCAGTTTTCAAGCAGGCAGGTTTTCAGTTATTTATTCACAAAACCATCATGAAAAAGATTGAGAGTTCCCTGCTTCCATTTCTTGATCATGCATGGAAAGAAGGGTTGGAAGTGGACTTGCAAGATGTTTTTCAAAGGTTAACTTTTGACAACATCTGTTCCATAGTGTTAGGATATGATCCTAATTGCCTTTCCATTGAACTCCCTCACGTTGCATGTGAAAAAGCATTCACTGATGTCGAGGATGCTCTGTTGCACAGACATGTCATGCCAAGATGCTTATGGAAGCTGCTGAAATGGCTTAATGTTGGAACTGAGAAGAAGCTGAAAGAAAGCCAGATAGTTATTGACCAGATGTTGTATGAAGAAATCGCATCCAAGTGCAACGTGAAAGGCCAAAGCAGTAGCAATAGCGGCCTAGCAAATAAGTCACCGTTTAGCTTGTTAAATGTTCTTATAGATGAGGTAGGAAAGGGAAATATAAATGACAAGTTTATGAGAGACACAGCGCTGAATCTCCTTGCAGCTGGGAGAGACACCATTAGTGCAGGTCTCACTTGGTTTTTCTGGCTGGTTGCAACACACCCATCTGTGGAATCCAATATTCTTCAAGAGATTCGAGAAAATTTGCCATCAAGAGAAGGTAATTGGAAGGATTTAGGTGTCGAAAGGCTTAGCAGATTAATTTACCTCCATGCAGCATTATGTGAAGCCTTAAGGCTTTATCCTCCATTACCTTTCGAGCACAAGTGTGCATTAAAATCTGATGTTCTTCCTAGTGGCCATGGGATTAATTCAAATACCATGATATTATATTCTCTATATTCAATGGGAAGGGTGAAAGAAATATGGGGAGAAGATTGCTTGCAATTTAGACCAGAGAGGTGGATTTCTAAGAAAGGAGGGATTATTCATATGCCCTCTTACAAGTTCATTGCTTTTAATGCTGGACCAAGAAGTTGTTTGGGTAAGGACATAAGCTTCACTGAGATGAAGATGGTTGCTGCTGCTATACTGTGGAATTATCACATCAAAGTAAGCGAAGGCCACCCCATATCCCCCAGTGTTTCCATTGTCCTTCATATGAGACATGGCTTGAAGGTTAAGGTGACAAACAGAAACATTTGA 1515 0.4112 MAVLGSGELLAAFLVFVIIYYWILNRRTPITKWPVLGMLPGLFLNKSSIYDYVTSVLKEQGGTAMFEGPWLSNMNFFCTSDPLNVQHITSTKFENYGKGDDFGEIFEILGDGIFRSDSLLWKYNRTILHSVFKQAGFQLFIHKTIMKKIESSLLPFLDHAWKEGLEVDLQDVFQRLTFDNICSIVLGYDPNCLSIELPHVACEKAFTDVEDALLHRHVMPRCLWKLLKWLNVGTEKKLKESQIVIDQMLYEEIASKCNVKGQSSSNSGLANKSPFSLLNVLIDEVGKGNINDKFMRDTALNLLAAGRDTISAGLTWFFWLVATHPSVESNILQEIRENLPSREGNWKDLGVERLSRLIYLHAALCEALRLYPPLPFEHKCALKSDVLPSGHGINSNTMILYSLYSMGRVKEIWGEDCLQFRPERWISKKGGIIHMPSYKFIAFNAGPRSCLGKDISFTEMKMVAAAILWNYHIKVSEGHPISPSVSIVLHMRHGLKVKVTNRNI* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0562 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Apr3g0562 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 PANTHER CYTOCHROME P450 2 503 - -
Apr3g0562 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 Gene3D Cytochrome P450 28 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 Pfam Cytochrome P450 31 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 SUPERFAMILY Cytochrome P450 32 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0562 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0562 Apr-Chr3 12296178 12297692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0562 1 503 Cytochrome P450 AT2G23180 43.870 6.69e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0562 - - gmx:100785815 823.542