Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0551 ATGGAGTCAACTGTTGATGGACTTGAGTCTATATCAGACGTTCAGAATTCAGTTTCTGTGATAGAGCATGATCCTCCTTCCACTTCTGGGATTCCAAGATCTTCTCGGCCTCCATTAAGAGCATCTAAAAATAACGGGGCTTCTTCTAGTCACCATAACTATGGAATGAAGACCATCCTCCATCAAAAGCATGCTTATCATGAGGCTCACGATGTTGAACATGATAAAATGCCCAACATGGAAAAGCCGGATTATAGCACTAATGGCAAATCTGACTATGTGAGCCTTAATAAAGATGTTGAAAGTTGCTTAGGGAAGAATATTTCCACAATGGAAACAAAATTAAGCATCAAACAATCATTTGATGCTTCCAAGAATTGTGATTCTAGTGGTGTATTAGAATCTGATAATTGCAAATTAGGTTCCTCAAAAGGAGTTGTTGATGAAACAAAGAGTTGCTGTCACTCAGAGATTACTTTCTGTCCAAGTCCTCAGAATAGTTTCTATTCAGAAGCCAAAGAAAGTTTCACCAATACTGGAGTCAGTGAATGTGTTAGTGTTGATAAGTCAGTTGAAAGTGGAGAAGTTACTAATTCCTGTGAATTTAATGAGAGCCGGAAGACCAGCATCTATAGAGGGAGTACTGGAAGTGACGTTAGTGATGAGAGCAGCACCAGTAGTTTGACCAGTGCTTTGTATAAACCCCACAAGGCTAATGACATAAGATGGGAAGCAATTCAAGCCATCCGAGCTCGTGATGGGGTGTTGGAAATGAGGCATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTGGCTGAGTTAAGTGGCACAAGGACTTGTTTTGCAATGAAAGTCATGAACAAAACCGAGCTGGCAAGTCGCAAGAAGCTTGTTAGGTCTCAGACAGAGAGAGAGATATTGCAGTCTCTAGATCATCCATTTCTACCCACATTATATACTCACTTTGAGACAGAGACATTCTCCTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCACTCAGGCAAAGACAACATGGGAAGTATTTCTCAGAGCATGCTGCCAGGTTTTATGTGGCGGAGGTTCTCCTTGCTTTGGAGTACCTGCATATGCTTGGGATCATCTACCGAGACCTTAAACCCGAGAATGTGTTGGTGAGAGAAGATGGTCATATAATGCTATCAGACTTTGATCTCTCTCTAAGGTGTGCTGTCAGTCCAACTCTGGTGAAGTCATCAAACTCTAGCTTGGAGACCAAAAATGCAGGATACTGCATTCAACCAGCCTGCATTGAGCCAACTTGTGTAATGCAGCCAGACTGCATCCAACCTTCATGTTTCACGCCACGTTTTCTATCTGGAAAATCCAAGAAAGAAAAGAAGTCCAAACCAAAGAATGACGTGCAAAACCAGGTGACCCCTCTCCCGGAGCTCATTGCCGAGCCCACAAATGCTCGATCAATGTCCTTCGTGGGTACACACGAGTACCTGGCACCTGAAATCATCAAAGGCGAAGGGCATGGCAGTGCAGTAGACTGGTGGACATTTGGGATATTCTTATACGAGCTCTTGTTCGGTAGAACACCATTCAAAGGTTCAGCAAACCGAGCAACACTATTTAATGTTGTTGGTCAGCCCTTAAAATTTCCAGAATCCCCTACTGTCAGCTTTGCTGCCAGGGACTTGATCAGGGGTTTACTGGTGAAAGAGCCTCAGCATAGGCTCGCCTATAGACGTGGAGCTACAGAGATTAAGCAACATCCATTCTTTCATAATGTTAACTGGGCACTGATCCGTTGTGCAAATCCTCCAGAGGTTCCAAGACAGGCCATGAAAGCACTTGCAGCTGAAAAGGTGCCTGGTGTGAAGCCTGCTGGTAACTATTTAGATATTGATTTCTTTTGA 1929 0.4349 MESTVDGLESISDVQNSVSVIEHDPPSTSGIPRSSRPPLRASKNNGASSSHHNYGMKTILHQKHAYHEAHDVEHDKMPNMEKPDYSTNGKSDYVSLNKDVESCLGKNISTMETKLSIKQSFDASKNCDSSGVLESDNCKLGSSKGVVDETKSCCHSEITFCPSPQNSFYSEAKESFTNTGVSECVSVDKSVESGEVTNSCEFNESRKTSIYRGSTGSDVSDESSTSSLTSALYKPHKANDIRWEAIQAIRARDGVLEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELASRKKLVRSQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQHGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSSLETKNAGYCIQPACIEPTCVMQPDCIQPSCFTPRFLSGKSKKEKKSKPKNDVQNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLKFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQAMKALAAEKVPGVKPAGNYLDIDFF* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0551 642 Gene3D Transferase(Phosphotransferase) domain 1 345 412 - -
Apr3g0551 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
Apr3g0551 642 SUPERFAMILY Protein kinase-like (PK-like) 241 617 IPR011009 -
Apr3g0551 642 MobiDBLite consensus disorder prediction 1 53 - -
Apr3g0551 642 Pfam Protein kinase domain 262 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0551 642 Pfam Protein kinase domain 495 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0551 642 Gene3D Transferase(Phosphotransferase) domain 1 492 616 - -
Apr3g0551 642 SMART serkin_6 261 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0551 642 CDD STKc_phototropin_like 259 618 - -
Apr3g0551 642 Gene3D Phosphorylase Kinase; domain 1 259 344 - -
Apr3g0551 642 PANTHER FLIPPASE KINASE 1-RELATED 4 642 - -
Apr3g0551 642 ProSiteProfiles Protein kinase domain profile. 261 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0551 642 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 4 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0551 Apr-Chr3 12114622 12118908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0551 186 642 AGC Kinase Gene Family AT5G47750 72.421 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr3g0551 Pkinase 8.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0551 K08286 - gmx:100802402 1131.7