Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0538 ATGGGTAGCTGGCACGACAAGATGAGGCAGAACGATCCGATTCTGAGCATGGGAAGAAAGCAAGTAGTTGAAGAAGAAGAAGAATCTGAATCTCCGTTGCTGGGCAAGTCAAACGCATGGTTTAGTGGTTGTGTGTTCAATCTGTCAACGACGATCATTGGCGCTGGGATCATGGCCTTACCTGCGGCCATCAAAGTTGTGGGTCTGGCTGTGGGCATTGCTGCCATTCTCTTTCTTGCCTTTCTCACACACACCTCTTTAGAAATTCTCCTGAGGTTTAGCAGACTTGGCAACGCTGCCACTTACGCTGACCTCATGGGTTACGCTTTTGGAACGCTTGGCAGATTGCTACTTCATATATCCGTTCTCGTCAACAACTTTGGAATACTTGTTGTCTACATGATCATAATCGGTGATGTGTTATCTGGAACATCTTCAAGTGGGATTCATCATTTTGGGGTACTTGAAGGATGGTTTGGTCAATGCTGGTGGACTTCCCGTAGTTTTGTTCTTCTTGTGGCAACCCTTTTTGTTTTCGCTCCATTGGGATTCTTTAAGAGGATAGATTCATTGAGATACACTTCTGCTTTAGCAGTGGCTCTCGCTGTTGTGTTTCTAATCATAACTGCTGGAATCACATTCATCAAGTTGCTTAATGGCAGTATAGCCAGTCCCAGGTTGCTTCCTAGTATTACTGATATTACATCAGTGTTCAATCTCTTTACGGCAGTTCCAGTCTTTGTGACGGCATTTGTTTGTCATTACAATGTGCATACAATAAACAATGAATTAGGAGACTCTTCCCTGATACAACCAGTAATACGTGCATCACTGGTTCTATGTTCTAGTATCTATATTCTTACAGCATTATTTGGATTTCTTCTATTTGGTGAGTCAACACTTGATGATGTGCTAGCCAACTTTGACACTGATCTGGGCATCCCTTACAGCAGTTTTCTCAATGACATTGTTCGTATCAGCTATGCCATCCACCTCATCCTTGTTTTCCCAGTTATCTTCTTCTCACTGCGCTTCAATTTGGATGATCTTATCTTTCATTCAGCTAGGTCGTTGAACTTGGATAACTGTAGGTTTGTCTTGATCACCACTGGACTAGTCACTTTAGTCTATGTGGCTGCAAATTTTATACCTAGCATCTGGGATGCATTTCAATTCACTGGAGCAACTGCCACTGTTTGCCTTGGGTTTATTTTCCCTGCTGCAATTGCTCTAAGGGATCCCCACGACATTGCAACAAAGAAGGACAAGATTTTATCCGTTGTCATGATTTGTGTGGCTTTGTTTTCGAATGTTGTGGCCATTTACAGTAATGCCGATGCCTTGTTCAGAAAATAG 1356 0.4277 MGSWHDKMRQNDPILSMGRKQVVEEEEESESPLLGKSNAWFSGCVFNLSTTIIGAGIMALPAAIKVVGLAVGIAAILFLAFLTHTSLEILLRFSRLGNAATYADLMGYAFGTLGRLLLHISVLVNNFGILVVYMIIIGDVLSGTSSSGIHHFGVLEGWFGQCWWTSRSFVLLVATLFVFAPLGFFKRIDSLRYTSALAVALAVVFLIITAGITFIKLLNGSIASPRLLPSITDITSVFNLFTAVPVFVTAFVCHYNVHTINNELGDSSLIQPVIRASLVLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSSFLNDIVRISYAIHLILVFPVIFFSLRFNLDDLIFHSARSLNLDNCRFVLITTGLVTLVYVAANFIPSIWDAFQFTGATATVCLGFIFPAAIALRDPHDIATKKDKILSVVMICVALFSNVVAIYSNADALFRK* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0538 451 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 8 451 - -
Apr3g0538 451 PANTHER AMINO ACID TRANSPORTER 8 451 - -
Apr3g0538 451 Pfam Transmembrane amino acid transporter protein 45 443 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0538 Apr-Chr3 11621290 11624887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0538 37 451 Amino Acid or Auxin Permease AAAP Family AT3G30390 65.301 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0538 K14207 - gmx:100778699 705.671