Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0511 ATGGATTCTCCTTCCTCGCACACACAAACATCTCCACCGCTACCTCCAGGGATAGGCTCTCCCACTCCTCCTACCACTGCACCCTCACTCCCAATCCTTTTGGTTCCCAAGCCCGAACCCTTGGACGAATTATTCGCCACTCCTCAGCACTCCTCCGATCACCAACATCACTTATGCTCCGAGTTCAACCGAGTTTCCCAGTTATTCCGCGTCGCCTTTGCCAAGACCTCGCCCGGAGCCAAGGTAACTGCTCCTCCGGACCCGTTCCCGCCCACCGTTTCACAGCCCGATCCGGGCCCAGAATATGCAAACACCGGCGTTTCCTGCTCACATTCGCAGCCCATCAATGTCTCGGATCCGAACTCGCGAGCGATCGTTCCGGTTCCTCCGCAGCGGCGGGAACGGACGGTGGCGGTAGCGAGGAGTAGGCAGGGCCGGCGGAAGGAGCTGGTGAGGGTGGCGGATCTCTCGGCGAAGGAGCTGATGCATTTCCGTGAGGTGATGAGGAGAACGAGGTTGACCTACGACTCTATCCGCGTTTGGACGTTCCTGGAAGAGGAGAAGAGGGTGGCTGAGGCTGCTACGATGGCTGAGGCTGCCACGTTGGCTGCGGAATCGGACGAGGATAAGCGGCCGCGGCGGCTGCGCGGGGACCTGAGAGCGGCGGCACGAATGAAAGAACGTGGATTGTGGCTGAATCGTGATAAAAGGATCGTTGGGGCGTTACCTGGGGTTATGGTTGGGGATTTGTTTTTGTTTAGGATAGAGCTGTGTGTGGTTGGGTTGCACGGTCAGATACAGGCTGGAATTGATTATCTTCCTGGGAGCATGAGTTCTAACGGGGAACCCATAGCTACTAGTGTCATTGTTTCTGGTGGTTATGAGGATGATAAGGATGATGGTGAGGTTATACATTACACTGGTCATGGAGGGCAGGACAAGAATTCCTCTAGGCAGATTAGTGATCAGAGGTTGGAGGCAGGAAATCTTGCATTAGAGAGGAGCATGCATTATGGCATTGAAGTGCGAGTTATACGCGGGATGAAGTACGAGGGCAGTGCCTCCGCTTCTGGTAAGGTTTATGTGTATGATGGATTGTATAGGATTGTTGATTGCTGGTTTGAAGTGGGGAGATCTGGTTTTGGAGTGTATAAGTATAAGCTTTACAGGATAGTCGGACAGTCTAAGATGGGCAGTGCCGTTTTGAGGGACGCTAAGAATATTAGGAGTGGTTTGGAATTTGATCCTCTGAGTTGTCTTTGTACTGATTTGTCCAACGAGAAGGAGAGTGTTGCCGTTCGGCTGTTCAATGACATTGATGACAACAAGGACCCTCTTTCTTTTGAGTATCTTGCAACGATAAGTTTTCCCCAGTTTGTTTTTCATCAGTATGGGAAAGCTACTGGCTGTGATTGTGTAGATGGATGCGGTGACGGATGCTTCTGTGCTATAAAAAATGGGGGCGACTTTCCTTATAGTCTGCAGGGGTTTCTCCTGAGAGGGAAGCCTTTGATTTTTGAATGTGGCCCTTTTTGCAGTTGTCCTCCGCATTGTCGGAATCGTCTTACGCAGAGAGGGCTGAAAAATAAGTTGGAAGTGTTTAGGTCTCAGCTAAAGAGTTGGGGAGTTAGGTCCTTGGACCTTATTCAAGCTGGTTCCTTTATCTGCGAGTATACGGGGGTTGTTTTGACTCGGGCGCAAGCGCAAATCTTGACAATGTATGGTGACTCGTTGATATATCCTAATCGGTTCTCCGAAAGATGGGCAGAATGGGGGGATTTGTCTCCGATATACCCAGATTATGTGCGTCCATCATATCCATCAGTACCTCCCCTAGATTTTTATCTGGATGTGTCAACTATGAGGAATGTCGCGTGCTATATCAGCCATAGTTCCACTCCAAATGTCATGGTTCAGTTTGTTTTGTATGATCACAACAATTTGACGTTCCCTCACCTTATGCTATTTGCAATGGAGAACATCCCTCCGATGAGAGAGCTCAGCCTTGATTATGGTGTAGCTGATGAGTCGACAGGCAAGCTCGCTATTTGTAACTGA 2058 0.5019 MDSPSSHTQTSPPLPPGIGSPTPPTTAPSLPILLVPKPEPLDELFATPQHSSDHQHHLCSEFNRVSQLFRVAFAKTSPGAKVTAPPDPFPPTVSQPDPGPEYANTGVSCSHSQPINVSDPNSRAIVPVPPQRRERTVAVARSRQGRRKELVRVADLSAKELMHFREVMRRTRLTYDSIRVWTFLEEEKRVAEAATMAEAATLAAESDEDKRPRRLRGDLRAAARMKERGLWLNRDKRIVGALPGVMVGDLFLFRIELCVVGLHGQIQAGIDYLPGSMSSNGEPIATSVIVSGGYEDDKDDGEVIHYTGHGGQDKNSSRQISDQRLEAGNLALERSMHYGIEVRVIRGMKYEGSASASGKVYVYDGLYRIVDCWFEVGRSGFGVYKYKLYRIVGQSKMGSAVLRDAKNIRSGLEFDPLSCLCTDLSNEKESVAVRLFNDIDDNKDPLSFEYLATISFPQFVFHQYGKATGCDCVDGCGDGCFCAIKNGGDFPYSLQGFLLRGKPLIFECGPFCSCPPHCRNRLTQRGLKNKLEVFRSQLKSWGVRSLDLIQAGSFICEYTGVVLTRAQAQILTMYGDSLIYPNRFSERWAEWGDLSPIYPDYVRPSYPSVPPLDFYLDVSTMRNVACYISHSSTPNVMVQFVLYDHNNLTFPHLMLFAMENIPPMRELSLDYGVADESTGKLAICN* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0511 685 MobiDBLite consensus disorder prediction 1 35 - -
Apr3g0511 685 Pfam Pre-SET motif 425 521 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr3g0511 685 Pfam SET domain 541 672 IPR001214 GO:0005515
Apr3g0511 685 SUPERFAMILY SET domain 431 676 IPR046341 -
Apr3g0511 685 ProSiteProfiles YDG domain profile. 240 390 IPR003105 -
Apr3g0511 685 ProSiteProfiles SET domain profile. 529 672 IPR001214 GO:0005515
Apr3g0511 685 SMART G9a_1 235 394 IPR003105 -
Apr3g0511 685 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 30 682 - -
Apr3g0511 685 Gene3D - 221 405 IPR036987 -
Apr3g0511 685 SUPERFAMILY PUA domain-like 221 402 IPR015947 -
Apr3g0511 685 SMART preset_2 421 513 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr3g0511 685 ProSiteProfiles Pre-SET domain profile. 468 526 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr3g0511 685 MobiDBLite consensus disorder prediction 107 126 - -
Apr3g0511 685 Pfam SAD/SRA domain 239 394 IPR003105 -
Apr3g0511 685 SMART set_7 529 678 IPR001214 GO:0005515
Apr3g0511 685 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 60 685 IPR025794 GO:0016571
Apr3g0511 685 MobiDBLite consensus disorder prediction 9 35 - -
Apr3g0511 685 Gene3D SET domain 406 685 IPR046341 -
Apr3g0511 685 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 30 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0511 Apr-Chr3 10737318 10742904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0511 165 674 Su(var)3-9 homologs AT5G04940 38.580 3.12e-104 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr3g0511 SAD_SRA 2.2e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0511 K11420 - gmx:100785015 915.22