Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0501 ATGTCAATCCTCCGTGTGTTGCTCTTTCTGGGACTCTTGGCTGAAATTCATGTTACCTTTTCATTCACTGATCCTCAAGACGTTGTTGCACTTCGATCTTTAGAAGATGTATGGCAAAATACACCACACAGCTGGGGCAAATCAGATGATCCCTGTGGAGCACCCTGGGAAGGAGTGACCTGCAACAAATCAAGGGTTACTTCATTGGGACTGTCAACCATGGGCCTGAAGGGTAAATTAAGTGGAGATATAAGTGGTCTAACAGAATTGAGATCCTTGGACTTGTCATTTAATAGAGGTTTAACAGGTCCTCTCTCTCCACAGTTAGGAGAGCTAAGCAAGCTAAATATTTTGATTTTGGCTGGGTGCAGTTTCAGTGGCAATATTCCAGACGCAATAGGAAATCTTTCAGAGTTATCTTTCCTGGCTTTAAATTCAAACAACTTCACTGGAAAAATACCTCCTTCATTGGGTAAACTCTCCAAACTTTATTGGTTGGACTTGGCAGACAATCAGCTGACTGGGCCTATTCCAGTTTCAACCTCCACTACCCCTGGATTAGACCTTCTTTTAAAGGCTAAGCACTTCCATTTCAATAAGAACCAGCTTTCAGGTTCCATTCCCCCCAAACTTTTCAGCTCTGACATGGTACTCATACACATATTATTTGATGGAAATAATTTAAGTGGGACTGTACCTTCAACAATAGTACTAGTTAAGACCGTTGAGGTTCTTCGGCTCGATAGGAATTCTCTGACAGGAGAGGTCCCAGCAAATCTCAACAACCTTACAAACATCAACGAATTGAATTTAGCACATAATGATTTCACAGGTCCTTTGCCTGACTTAACTGGAATGGATACCCTCAACTATGTTGATCTTAGTAACAACTCTTTTGATCCATCTGAAGCTCCAACTTGGTTCATAACTCTTCCATCACTCACCACTCTTATCATGGAGTTTGGATCTCTTCAAGGTCCTCTTCCATCAAAACTCTTCGACATTCCTCAAATACAGCAAGTGAAACTACGAAACAATGCATTGAACAATACATTGGATATGGGGGACAACATTTGTCCCCAATTGCAGCTGGTAGATTTGCAAGACAATGAGGTCTCCTCAGTGACACTGAGTTCCCAATACAGAAATACATTGATTCTTATAGGAAATCCGGTGTGCAGTACTGCGCTCTCAAATACAAATTACTGCCAACTTCAGCAACAGCCTAAACAACCCTATTCCACAAGCTTGGCTAATTGTGGAGGCAAATCTTGTACTCCTGATCAGAAGCTCAGCCCCCAAAGTTGTGACTGTGCCTATCCATATGAAGGAATGCTGTACTTCAGAGGACCCTCATTCAGAGAACTATCTAATGTTAATACTTTCCATTCACTTGAAATGAGCCTATGGGTGAAATTGGGTCTAACTCCTGGCTCAGTTTCTTTGCAAAACCCCTTCTTCAATAGTGATGATTATCTTCAAGTGCAACTTGCACTCTTTCCACCTACAGGGCAATATTTTAATAGGACAGAAATTCAAAGAATTGGGTTTGAATTGAGTAATCAAACTTACAAGCCTCCGAAAGAGTTTGGTCCATATTACTTTATTGCATTTCCTTATCCTTTTCCAGGTTCCCACAAAGCCTCTCTTAGCAAAGGTGTTGTTATTGGGATAGCAATTGGCTGCACATTTCTGGTTATGAGCCTCATAGGGTTAGCTATGTATGCGATTCTGCAAAAGAAGCGCGCTGAGAGAGCCATTGGATTAAGTAGACCATTTGCATCATGGGCACCAAGTGGCAAGGATAGTGGAGGTGCGCCACAATTAAAGGGAGCAAGATGGTTCTCCTATGATGAGCTCAAAAAGTGCACCAACAATTTCTCTGAAAGCAATGAGATAGGCTTTGGTGGCTATGGCAAGGTGTACAAAGGGATTCTCCCTGATGGGAAAATGGTTGCAATCAAACGAGCTCAGCAAGGATCAATGCAAGGAGGCCTAGAGTTCAAGACTGAAATTGAGTTGCTTTCAAGAGTTCATCACAAGAATCTTGTTGGCCTCGTGGGATTCTGCTTTGAACAGGGGGAACAGATGTTGGTGTATGAGTTTATACCCAATGGAACACTTAGGGAGAGTTTGTCAGGGAGATCTGACATTCATCTTGACTGGAAGAGGAGACTTCGCATTGCACTTGGTTCAGCCAGAGGACTTGCATACTTACATGAACTTGCCAACCCTCCCATAATCCACAGAGATGTGAAGTCCTCTAATATCTTGCTGGATGAAAATTTGACAGCAAAGGTTGCAGATTTTGGCTTGTCTAAGCTAGTATCAGACAGTGAGAAAGGCCATGTTTCAACTCAGGTTAAAGGGACTTTGGGTTATCTGGATCCTGAGTATTACATGACACAACAACTTACTGAAAAGAGTGATGTGTATAGTTTTGGGGTGGTTATGCTTGAACTAATAACTTCAAGACAACCAATTGAGAAAGGCAAGTACATTGTCCGCGAGGTACGCACGTTGATGAATAAGAAGGATGAAGAACACTATGGTTTGAGGGAACTCATGGATCAAGTGGTTAGAAACACACCAACCCTCATAGGATTTGGGAGGTTCTTAGAGTTGGCACTGCAATGTGTTGAGGAATCAGCTTCAGACCGTCCAACAATGAGTGAAGTTGTGAAAGCACTTGAAACCATTTTACAGAATGATGGGATGAACACAAACTCCACTTCTGCATCTTCATCTGCCACTGACTTCGGAGTTTCTAAGGGTGCTATGAGACATCCTTATATTGATTCTACTTTTACTAAGAAGGACAGTGTTAATGATAGTAGTAATGCCTTTGACTACAGCGGAGGGTACACACTTTCAACAAAAGTTGAACCCAAATAG 2895 0.4204 MSILRVLLFLGLLAEIHVTFSFTDPQDVVALRSLEDVWQNTPHSWGKSDDPCGAPWEGVTCNKSRVTSLGLSTMGLKGKLSGDISGLTELRSLDLSFNRGLTGPLSPQLGELSKLNILILAGCSFSGNIPDAIGNLSELSFLALNSNNFTGKIPPSLGKLSKLYWLDLADNQLTGPIPVSTSTTPGLDLLLKAKHFHFNKNQLSGSIPPKLFSSDMVLIHILFDGNNLSGTVPSTIVLVKTVEVLRLDRNSLTGEVPANLNNLTNINELNLAHNDFTGPLPDLTGMDTLNYVDLSNNSFDPSEAPTWFITLPSLTTLIMEFGSLQGPLPSKLFDIPQIQQVKLRNNALNNTLDMGDNICPQLQLVDLQDNEVSSVTLSSQYRNTLILIGNPVCSTALSNTNYCQLQQQPKQPYSTSLANCGGKSCTPDQKLSPQSCDCAYPYEGMLYFRGPSFRELSNVNTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPTGQYFNRTEIQRIGFELSNQTYKPPKEFGPYYFIAFPYPFPGSHKASLSKGVVIGIAIGCTFLVMSLIGLAMYAILQKKRAERAIGLSRPFASWAPSGKDSGGAPQLKGARWFSYDELKKCTNNFSESNEIGFGGYGKVYKGILPDGKMVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFIPNGTLRESLSGRSDIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSSNILLDENLTAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITSRQPIEKGKYIVREVRTLMNKKDEEHYGLRELMDQVVRNTPTLIGFGRFLELALQCVEESASDRPTMSEVVKALETILQNDGMNTNSTSASSSATDFGVSKGAMRHPYIDSTFTKKDSVNDSSNAFDYSGGYTLSTKVEPK* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0501 964 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Apr3g0501 964 Gene3D Phosphorylase Kinase; domain 1 601 702 - -
Apr3g0501 964 CDD STKc_IRAK 633 900 - -
Apr3g0501 964 SMART serkin_6 627 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0501 964 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 6 933 - -
Apr3g0501 964 Gene3D Ribonuclease Inhibitor 284 385 IPR032675 -
Apr3g0501 964 PANTHER LRR RECEPTOR-LIKE KINASE 6 933 - -
Apr3g0501 964 SUPERFAMILY L domain-like 42 394 - -
Apr3g0501 964 ProSitePatterns Protein kinases ATP-binding region signature. 633 655 IPR017441 GO:0005524
Apr3g0501 964 Gene3D Transferase(Phosphotransferase) domain 1 703 923 - -
Apr3g0501 964 ProSiteProfiles Protein kinase domain profile. 627 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0501 964 Gene3D Ribonuclease Inhibitor 183 283 IPR032675 -
Apr3g0501 964 Pfam Protein tyrosine and serine/threonine kinase 630 897 IPR001245 GO:0004672|GO:0006468
Apr3g0501 964 SUPERFAMILY Protein kinase-like (PK-like) 612 911 IPR011009 -
Apr3g0501 964 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Apr3g0501 964 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0501 Apr-Chr3 10534687 10541699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0501 21 964 Receptor kinase-like Gene Family AT1G79620 72.587 0.0 1444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Apr3g0501 PK_Tyr_Ser-Thr 4.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0501 - - gmx:100792249 1773.06