Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr3g0477 | ATGGAGGATAATGATCAGACATTGTTCACTGGCAAAGATGATGCCGTAGTGAATGGCTTGGCTGCACTTAGCTGTGTGGTGGCTATGATCACAATGTACCGTCTCATAAAAATGCTTTGCTGCAGCAAGCATTATAATATCAGAGACTACCAAAACATATTGGCACAGGCACAGGCACAGTCCGCAGCTAGGGCACTTGCACAAGCGGTGAGCATGGAAGAGAGAATTGCGGTGTCGCACCTGATTCCAACCCACAAGTATGAGAAGAAGAAGAACGATGATGATGACGTGGCAGATGGTGATGAAAATGACACGTGTGCTGTGTGTTTAGGAGACTTCGAAGAGGGTGAAGAGTTGAGGACGCTGCCGGAGTGCCTGCACTCTTTCCACGTGCAATGCATAGATAAGTGGCTCCATCACCATTCCAATTGCCCTATTTGTCGTGCTCCTGTAACACCTTCATCGGCGATGCTCCACCGTTCGCCGGAGTTTGGCTCCGGTAAACTCTTACAAAATCCATCCCCAAGTCCTCCAGAACCTCCAATTCCAACCAAACCATATCATCACCATGGTAATGGCCTTGACATTCAGTATGGATTCCTGTAA | 606 | 0.4802 | MEDNDQTLFTGKDDAVVNGLAALSCVVAMITMYRLIKMLCCSKHYNIRDYQNILAQAQAQSAARALAQAVSMEERIAVSHLIPTHKYEKKKNDDDDVADGDENDTCAVCLGDFEEGEELRTLPECLHSFHVQCIDKWLHHHSNCPICRAPVTPSSAMLHRSPEFGSGKLLQNPSPSPPEPPIPTKPYHHHGNGLDIQYGFL* | 202 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr3g0477 | 201 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 76 | 155 | IPR013083 | - | |
Apr3g0477 | 201 | PANTHER | CHROMATIN REGULATOR PHD FAMILY-RELATED | 16 | 157 | - | - | |
Apr3g0477 | 201 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 16 | 157 | IPR044675 | - | |
Apr3g0477 | 201 | ProSiteProfiles | Zinc finger RING-type profile. | 106 | 148 | IPR001841 | - | |
Apr3g0477 | 201 | Pfam | Ring finger domain | 104 | 148 | IPR001841 | - | |
Apr3g0477 | 201 | SUPERFAMILY | RING/U-box | 86 | 154 | - | - | |
Apr3g0477 | 201 | CDD | RING-H2_PA-TM-RING | 105 | 148 | - | - | |
Apr3g0477 | 201 | SMART | ring_2 | 106 | 147 | IPR001841 | - | |
Apr3g0477 | 201 | MobiDBLite | consensus disorder prediction | 159 | 190 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr3g0477 | Apr-Chr3 | 9907667 | 9909684 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr3g0477 | 20 | 152 | C3H Transcription Factor Family | AT5G17600 | 34.307 | 1.19e-19 | 83.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr3g0477 | - | - | aprc:113859427 | 385.185 |