Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0470 ATGGAGGCAACAAGAATGGGCCAATGGTTAAGTCTTCTAATATGTGTACTAATGTTACTAAAGGCAGAAGGGGTTTCTGTTGGAATCACTTATGTTGAAAGTGCGGTAGCAAAAGGAGCTGTTTGTTTAGATGGGAGCCCACCAGCTTACCACTTCGATAAGGGATCTGGAGCAGGGATTAATAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGCCTTGCCCGTAGGGACACTCGTTTGGGTTCATCTAAGAAAATGGATAAGCAACTTTCCTTTTCTGGATTCTTTAGTAACGGCAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGATATTGTGATGGCTCATCATATACTGGTGATGTTGAAGCTGTTGATCCGGCAACCAACTTGCACTTCAGAGGAGCAAGGATTTTTGTTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTCTCTCTGGATGCTCAGCTGGAGGATTGACTTCTATTTTAAATTGTGATCGCTTCAAAGGTCTTCTACCTCCAACAACTAAAGTGAAATGCCTTTCAGATGCTGGTTATTTTATCAATGTAAAGGATGTCTCAGGAGCACAGCACATTGAAGAGATCTACGGTCAAGTTGTTCAATTGCATGGTTCAGCAAAAAATTTGCCTCGATCCTGCACTTCAAGACTTAGACCAGGGCTGTGCTTTTTCCCTCAAAATATGGCATCACAAATCAGTACTCCAATATTTTTTGTAAATGCAGCCTATGACTCATGGCAGATTAAGAACATTTTGGCACCCGGTGTTGCTGATCCCCATGGCACTTGGCGTGATTGCAAACTTGATATAAAAAACTGCTCACCAAATCAACTAAGTGTAATGCAAGGTTTCAGGACAGAATTCTTAAGGGCATTGAGTGCAGTTGGGAACACTCCATCTAAAGGGATGTTTATAGATGGTTGCTATGCACACTGCCAAACTGGAATACAGGAGACATGGATGAGAAATGACTCTCCAGTGTTGGCCAATACAACAATTGCAAAGGCAGTGGGAGATTGGTTTTACGAGCGAAGGCCTTTCCATCAGATAGATTGCGCTTACCCTTGCAATCCCACTTGTCATAATCGTGTTTTTGATTAA 1179 0.4156 MEATRMGQWLSLLICVLMLLKAEGVSVGITYVESAVAKGAVCLDGSPPAYHFDKGSGAGINNWIVHFEGGGWCNNVTTCLARRDTRLGSSKKMDKQLSFSGFFSNGKKFNPDFYDWNRIKVRYCDGSSYTGDVEAVDPATNLHFRGARIFVAVIEDLLAKGMKNAQNAILSGCSAGGLTSILNCDRFKGLLPPTTKVKCLSDAGYFINVKDVSGAQHIEEIYGQVVQLHGSAKNLPRSCTSRLRPGLCFFPQNMASQISTPIFFVNAAYDSWQIKNILAPGVADPHGTWRDCKLDIKNCSPNQLSVMQGFRTEFLRALSAVGNTPSKGMFIDGCYAHCQTGIQETWMRNDSPVLANTTIAKAVGDWFYERRPFHQIDCAYPCNPTCHNRVFD* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0470 392 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
Apr3g0470 392 PANTHER PECTIN ACETYLESTERASE 3 391 - -
Apr3g0470 392 PANTHER NOTUM-RELATED 3 391 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0470 Apr-Chr3 9780535 9787380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0470 5 391 Carbohydrate Esterase AT4G19420 61.137 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0470 K19882 - gmx:100781246 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0470 3 9780535 9787380 Apr3g0470 3 9780535 9787380 ECH