Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0469 ATGGAGATTACAAGAGTTAGCCAGTGGTTAACTCTTCTAGTTTTTTGTGTATTGCTATTGCTAAAGGCAGAGGGATCTTTTGTTCCAATCACTCTTGTCGAGAATGCAGTATCAAAAGGAGCTGTTTGTTTGGATGGCAGTCCCCCAGCCTATCACCTTGATATGGGATTTGGAGAAGGGATTAACAACTGGATTGTTCAGATTGAGGGAGGGGGATGGTGCAATGATGTTACTAGTTGCCTTTACCGTAAGAGCACTCGCTTAGGTTCATCCAAGCAAATGGATGGGCAAATTGGCTTTTATGGAATTTTAAGCAATGAGAAACAGTTTAATCCAGATTTCTATAATTGGAATAGAGTCAAGGTTAGGTACTGTGACGGGTCATCATTTACCGGTGATGTGGAAGAAGTTGATCCAACAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGCTGTAATGGAAGATTTACTAACAAAAGGAATGAAAAGCGCTGAAAATGCTATTCTCTCTGGATGTTCAGCTGGAGGGTTGACTACTATATTTCACTGTGATCACTTTAAATCTCTATTGCCTAGTGGAGCTAAAGTGAAATGTGTTCCAGATGCTGGTTATTTTATCAATGTAAAGGACATCTCTGGAGCACCACGCATTGAAGATTTCTATCATCAAGTTGTTGCAACACATGGCTCAGCTAAGCATTTGCCCACATCCTGCACTTCAAAACTAAGCCCAGCACTGTGCTTTTTCCCACAAAATGTGGCATCACAAATCAGTACCTCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATTAGGAACATCTTGGCACCGGGTGTTGCTGATCCCCGTGACCTTTGGCATAGCTGCAAGCTTGATATAAGTAACTGCTCACCTGATCAACTTAGTATTATGCAAGGCTTCAGGATGGAATTTATAAAGGCATTGAGCGTGGTAGGCAACTCCCCATCTAAAGGAATGTTCGTAGACTCTTGCTATGTCCACTGCCAAACAGAATCACAGGAGACATGGTTCAGCGGTGACTCTCCACAGCTTTCCAATAAAACAATTGCCAAGGCAGTAGGAGACTGGTTTTATGATCGAAGCCCTTTCCATACTATTGATTGCAGCTATCCTTGCAACCCCACTTGCCATAACCGTGTTTTTGATCTGAAAGACCACCCAGGAATATAG 1203 0.4248 MEITRVSQWLTLLVFCVLLLLKAEGSFVPITLVENAVSKGAVCLDGSPPAYHLDMGFGEGINNWIVQIEGGGWCNDVTSCLYRKSTRLGSSKQMDGQIGFYGILSNEKQFNPDFYNWNRVKVRYCDGSSFTGDVEEVDPTTNLHFRGARVFAAVMEDLLTKGMKSAENAILSGCSAGGLTTIFHCDHFKSLLPSGAKVKCVPDAGYFINVKDISGAPRIEDFYHQVVATHGSAKHLPTSCTSKLSPALCFFPQNVASQISTSIFFVNAAYDSWQIRNILAPGVADPRDLWHSCKLDISNCSPDQLSIMQGFRMEFIKALSVVGNSPSKGMFVDSCYVHCQTESQETWFSGDSPQLSNKTIAKAVGDWFYDRSPFHTIDCSYPCNPTCHNRVFDLKDHPGI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0469 400 Pfam Pectinacetylesterase 22 373 IPR004963 GO:0016787
Apr3g0469 400 PANTHER PECTIN ACETYLESTERASE 3 395 - -
Apr3g0469 400 PANTHER NOTUM-RELATED 3 395 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0469 Apr-Chr3 9761234 9765630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0469 5 400 Carbohydrate Esterase AT4G19420 59.629 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0469 K19882 - gmx:100776802 660.988