Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0459 ATGGAACTCAGCACTATGTTGTGCTTGTTTGTTTCTTTTCTCTTCATTGTTCTCTTCAAATCACTCATCAAATCTTTCTCTTTCTTCCCTTCCAAAGGGAGAGAATTGCCACTCCCTCCTGGCACCATGGGTTGGCCTTACATAGGAGAAACCTTCCAAATGTATTCTCAAGACCCAAACGTTTTCTTTGCCACAAAAATTAAAAGATATGGGTCTATGTTCAAGTCCCACATTCTGGGTTGTCCTTGTGTGATGATTTCTAGTCCAGAAGCAGCAAGATTTGTGCTGAACAAAGCTCAGCTCTTCAAACCAACATTTCCTGTTAGCAAAGAGAGGATGTTGGGGAAGCAAGCAATTTTCTTTCACCAAGGAGCATACCATGCTAACCTTAGGAGGCTTGTTCTTCGCACCTTCATGCCTGAGGCCATCAAAGACATCGTCTCTGACATCGAATCCATTGCCCAAAGTTGCCTCAAATCATGGGAAGGAAAGTTGATAACAACTTTCCTTGAAATGAAAACTTACACCTTCAATGTCGCTCTACATTCAATATTTGGAAGAGATGAAATCATGTATAGAGAGGATCTGAAAAGATGCTACTACACACTTGAGAGAGGGTACAACTCAATGCCCATAAACCTTCCAGGAACACTGTTCCACAAGGCCATGAAGGCAAGGAAAGAGCTTGCAAAGATCTTGGCGCAGATCATCACAACAAGGAGGAATATGAAGCAAGAGTACAATGACTTGTTAGGTTCCTTCATGGGTGAGAAAGCTGGACTGACTGATGAGCAAATTGCAGATAACATCATCGGTGTCATTTTTGCTGCTCGTGACACCACTGCTAGTGTACTTACTTGGATTGTTAAGTACCTAGGTGAAAATCCCACTGTCTTAGAAGCAGTAACTGAAGAGCAAGAGGCCATATTAAAGGGGAAAGAAGAAAGTGGTGAAGAAATGGGTCTGAATTGGTTAGACACAAAAAATATGCCTGTAACATCCAAGGTCATACAAGAGACTCTTAGAGTTGCCTCAATTTTGTCTTTTACTTTCAGAGAAGCAGTAGAGAATGTTGAATATCAAGGGTATCTTATACCAAAAGGGTGGAAAGTATTACCACTTTTCAGAAACATACACCACAGTCCTGACCACTACAAAGAGCCACAGAAATTTGATCCTTCAAGATTTGAGGTTGCTCCAAAACCCAATACCTTTATGCCATTTGGCAATGGGACCCATGCATGTCCTGGTAATGAATTAGCCAAGTTGGAGATTTTGGTGCTTCTACATCACCTGACCACAAAGTACAGGTGGACTGTAATAGGTGCAAAAGATGGAATTCAGTATGGCCCTTTTGCTCTTCCACAAAATGGATTGCCCATCACATTATACACCAAGAAATAA 1404 0.4145 MELSTMLCLFVSFLFIVLFKSLIKSFSFFPSKGRELPLPPGTMGWPYIGETFQMYSQDPNVFFATKIKRYGSMFKSHILGCPCVMISSPEAARFVLNKAQLFKPTFPVSKERMLGKQAIFFHQGAYHANLRRLVLRTFMPEAIKDIVSDIESIAQSCLKSWEGKLITTFLEMKTYTFNVALHSIFGRDEIMYREDLKRCYYTLERGYNSMPINLPGTLFHKAMKARKELAKILAQIITTRRNMKQEYNDLLGSFMGEKAGLTDEQIADNIIGVIFAARDTTASVLTWIVKYLGENPTVLEAVTEEQEAILKGKEESGEEMGLNWLDTKNMPVTSKVIQETLRVASILSFTFREAVENVEYQGYLIPKGWKVLPLFRNIHHSPDHYKEPQKFDPSRFEVAPKPNTFMPFGNGTHACPGNELAKLEILVLLHHLTTKYRWTVIGAKDGIQYGPFALPQNGLPITLYTKK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0459 467 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Apr3g0459 467 Gene3D Cytochrome P450 29 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 Pfam Cytochrome P450 39 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PANTHER CYTOCHROME P450 26 11 464 - -
Apr3g0459 467 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0459 467 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 11 464 - -
Apr3g0459 467 SUPERFAMILY Cytochrome P450 34 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0459 Apr-Chr3 9499041 9502139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0459 1 461 Cytochrome P450 AT4G19230 71.983 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0459 K09843 - gmx:100807446 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0459 3 9499041 9502139 Apr3g0459 3 9499041 9502139 ECH