Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0454 ATGCCAGAAAACAGCATAGCACCCAAAGCAGAACCCAGTAACAGTCACCCTGTTGAAGGGTCACTAGAGATGACTGGGTTCCATAACTTGACCATCCTTCCCATACAAAATAATCAGCAATCTTTTGCAAAACTTGCTGTGTATCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAGGTTAAAATAGAGCAGAAAGGTATTTGTTGGAGCAGCACAAGGAGTTCAAAAGAGAAGACCATATTGAATGGAATCACGGGTATGGTTTCCCCTGGAGAAATACTAGCTATGTTGGGGCCATCTGGGAGTGGCAAAACCACACTTCTAACAGCACTTGGAGGGCGTCTTAGGGGTAAACTCTCAGGAAAGGTCACATACAACAATCAGCCATTTTCAGGTGCCATGAAGAGAAGAACAGGTTTTGTGGCCCAAGATGATGTGCTATACCCTCATTTAACTGTAACTGAAACTCTACTCTTCACTGCACTTCTAAGGCTTCCCAATAGCTTAACCAGGGAAGAGAAAGTTGAACATGTAGAGAATATTATGAATGAACTAGGACTTAGTAGGTGCAGGGGTAGCATGATTGGAGGCCCACTTTTCAGAGGGATATCAGGGGGTGAGAAAAAGAGGGTAAGTATAGGCCAGGAAATGCTCATCAATCCAAGCCTGTTGCTGTTGGATGAGCCCACTTCAGGTTTGGACTCTACAACAGCACAGAGGATCATGAACACAATCAAACGCTTGGCCAGTGGTGGCAGAACTGTTGTCACCACCATTCACCAACCTTCGAGTCGCCTCTACCACATGTTTGATAAGGTTGTCTTGCTCTCTGAAGGGTGTCCCATCTACTATGGCCCTGCTTCTACTGCAATGGACTACTTTTCTTCTGTTGGTTTTTCCACACCCATGATTGTCAATCCAGCTGATTTATTGCTTGATCTTGCCAATGGGATTGCTCCGGATTCTAAACATGCAACTGAACAAAGTGAGAGCCAGGAAACAGAAAAGAAGTTGGTGAGAGAAGTTTTAATCTCTGCTTATGACAAGAACATAGCTACAAGGCTGAAAGCTGAGCTAAGTAGCTTGGAGGTGAACACCTACAATATCACCAAAGATCCCACAAGAAATCACATGAAACCGGAGCAATGGTGCACAAGTTGGTGGCATCAGTTCAAAGTGCTATTGCAAAGGGGTCTAAGGGAGCGAAGGTTTGAAGCGTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTCGCTTTTCTTGGTGGACTCCTGTGGTGGCACACCCCAAAATCACACATCGGAGATCGGATAGCCCTGCTGTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCTGTTTTCACATTTCCACAAGAGAGAAGAATGCTGATAAAGGAACGTTCATCAGGAATGTACCGTCTTTCTTCATACTTTCTAGCCAGAACAATAGGAGACTTGCCACTAGAGCTTGCACTTCCAACAGCATTTGTGTTCATAATATATTGGATGGGAGGGCTTAACCCTCATCCAATGACCTTTATCCTTTCCCTTCTTGTGGTCCTTTACAGTGTCCTCGTGTCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGGTTAAACAAGCCACTACTTTAGCTTCTGTGACAACACTTGTGTTTCTCATTGCTGGAGGATACTATATACAACAGATTCCTCCTTTCATAGAGTGGCTCAAGTACTTGAGCTATAGCTACTATTGTTACAAGATTCTCCTCGGTGTGCAATACAATGATGATGATCATTATGAGTGCTCAAAGGGGGTGTTGTGCAAGGTTAGTGATTTTCCTCCTATCAAATCAGTGGGTTTGAATGATTTGTGGGTTGATGTGTTTATTATGGCCCTTATGTTGGTGGGTTATCGACTAGTTGCTTACTTAGCACTTCAGAGAGTGAGGTAG 1959 0.437 MPENSIAPKAEPSNSHPVEGSLEMTGFHNLTILPIQNNQQSFAKLAVYPITLKFEELVYKVKIEQKGICWSSTRSSKEKTILNGITGMVSPGEILAMLGPSGSGKTTLLTALGGRLRGKLSGKVTYNNQPFSGAMKRRTGFVAQDDVLYPHLTVTETLLFTALLRLPNSLTREEKVEHVENIMNELGLSRCRGSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIMNTIKRLASGGRTVVTTIHQPSSRLYHMFDKVVLLSEGCPIYYGPASTAMDYFSSVGFSTPMIVNPADLLLDLANGIAPDSKHATEQSESQETEKKLVREVLISAYDKNIATRLKAELSSLEVNTYNITKDPTRNHMKPEQWCTSWWHQFKVLLQRGLRERRFEAFNRLRIFQVISVAFLGGLLWWHTPKSHIGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLNPHPMTFILSLLVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYLSYSYYCYKILLGVQYNDDDHYECSKGVLCKVSDFPPIKSVGLNDLWVDVFIMALMLVGYRLVAYLALQRVR* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0454 652 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 304 IPR003439 GO:0005524
Apr3g0454 652 Pfam ABC-2 type transporter 261 363 IPR043926 GO:0140359
Apr3g0454 652 ProSitePatterns ABC transporters family signature. 204 218 IPR017871 GO:0005524
Apr3g0454 652 SMART AAA_5 91 281 IPR003593 -
Apr3g0454 652 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 34 650 - -
Apr3g0454 652 MobiDBLite consensus disorder prediction 1 21 - -
Apr3g0454 652 Pfam ABC-2 type transporter 391 596 IPR013525 GO:0016020|GO:0140359
Apr3g0454 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 298 IPR027417 -
Apr3g0454 652 CDD ABCG_EPDR 49 286 - -
Apr3g0454 652 Pfam ABC transporter 82 232 IPR003439 GO:0005524
Apr3g0454 652 Gene3D - 63 298 IPR027417 -
Apr3g0454 652 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 34 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0454 Apr-Chr3 9273763 9276965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0454 81 280 Calmodulin-binding Proteins AT2G36910 30.000 8.58e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0454 K05681 - gmx:100776279 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0454 3 9273763 9276965 Apr3g0454 3 9273763 9276965 ECH