Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0452 ATGGGAGCAGTTTCAGTTTCAGTTTCAGGGGGTGAGATATGGAAGGCTCACACCGCCATGGCAATGGTTCAACTATTCAACGGAGGCTTCCACGTCATCACCAAATTGGCGCTCAATGTTGGGGTCAACCAAATCGTTTTCTGCGTCTTCCGCGATCTCCTTGCCTTCTCCATTCTCGCTCCCATCGCTTTTTTCCGTGAAAATACAGAAAGTGTGAACTTGCTAAGATATGAAGGTCTGGCCAAGGTTGGAGGGACATGTTCCTGTGTTTTTGGTGCTGTACTGATGGTTTTGTATCGTGGTCCAGCCTTGATAGGAAATTCAGAAACAGACTTCGCATCACATAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTGGTGGTTTACTGGATCTCGGATTCGACCATTTTCATCTTGGGGTTTTGTGCTTCATAGGGAACTGCATGTGCATGGCTGCTTTTCTAACCATTCAGGCTCCCTTATTAAAAAAGTATCCTGCAAATCTATCTGTCACAGCGTATTCGTACTTCTTTGGTGCTGTACTGATGGTAACTACATCATTCTTTGCAACTGATGAGTCAACTGACTGGAGTTTGACACGGTCTGAAATCATTGCCGTTATTTATGCTGGATTTATCGCATCAGCCCTTAATTATGGAATTATTACATGGTGCAACAAGATCTTGGGGCCAGCTATGGTTGCCCTTTATAATCCACTTCAACCTGGAGCTTCTGCTCTCTTGTCCAGAATTTTTCTTGGAAGTCCAATTTACATGGGAAGCATCACCGGTGGATCTTTCATCATTATTGGCTTGTATGCGGTTACATGGGCATCTTATAGAGAACGACATGCAGCCTCGGGAGTTATTTCTCATGGTACAAGGGTTGAATCACTAGTCCATGACAAGAGTTCATATAGAGTTCACATTTTCTCAGGGGGCCCCAGCTTGTCCCCAAAGCCATCGGATTAA 987 0.4458 MGAVSVSVSGGEIWKAHTAMAMVQLFNGGFHVITKLALNVGVNQIVFCVFRDLLAFSILAPIAFFRENTESVNLLRYEGLAKVGGTCSCVFGAVLMVLYRGPALIGNSETDFASHSEISAKGQPEPSGWLIGGLLDLGFDHFHLGVLCFIGNCMCMAAFLTIQAPLLKKYPANLSVTAYSYFFGAVLMVTTSFFATDESTDWSLTRSEIIAVIYAGFIASALNYGIITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSITGGSFIIIGLYAVTWASYRERHAASGVISHGTRVESLVHDKSSYRVHIFSGGPSLSPKPSD* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0452 328 Pfam EamA-like transporter family 144 281 IPR000620 GO:0016020|GO:0016021
Apr3g0452 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 201 287 - -
Apr3g0452 328 PANTHER WAT1-RELATED PROTEIN 69 314 - -
Apr3g0452 328 PANTHER WAT1-RELATED PROTEIN 14 66 - -
Apr3g0452 328 PANTHER WAT1-RELATED PROTEIN 69 314 IPR030184 GO:0016021|GO:0022857
Apr3g0452 328 PANTHER WAT1-RELATED PROTEIN 14 66 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0452 Apr-Chr3 9170189 9175498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0452 69 292 Nodulin-like Gene Family AT5G45370 63.839 3.37e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0452 - - gmx:100809051 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0452 3 9170189 9175498 Apr3g0452 3 9170189 9175498 ECH