Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0448 ATGACCAGTGATATGCCCCCGTCTATGGCTCAAAACGGTAGGTCAAGCAGATATTCCTTTGGCTCTAGCAATGGCAATGATGATGCCTCTCTACAAAATGGTGCTGCTGTTAGCAATGCTGATGACCATGACAGTGATAGCTCCAATTTTGCATCGCCCACACCATCAATGGCCATTCCAACAGAACTTGCTGGAGCTGTACCCTTGATTAGCAGATTCCAGGTGGAAGGATTCTTAAAATTAATGCAGAAACAAATTCAATCTGCTGGGAAACGTGGTTTTTTTTCTAAAAGATCTGTAGGTCCTCAAGTTCAAGAAAAATTTACATTTGAGGACATGTTGAGTTTCCAAAAGGATCCAATTCCAACAGCATTGCTTAAGATAAATGGTGATTTAGTGAGTCGGGCGATAAAGTTATTCCAAATAATTTTGAAATATATGGGAATCGATATGTCTGATCGTATAACTCCAATAAGCTTAGATGAACGAGTTGAGCTTGTAGGGAAGCTGTACAAGCAAAGTTTGAAGCGTTCAGAACTCCGAGATGAACTTTTTGTTCAGATATCGAAGCAAACAAGAAATAACCCAGAGAGGCAATACTTGATTAAAGCATGGGAGCTCATGTATTTATGTGCATCCTCAATGTCTCCTAGTAAAGATATTGGCAGTTATCTATCAGAATACATTCATAACATAGCAAATGGTGTGACTACTGATCCTGAGATTCAAGCCATTGCATTAAATACATTAAATGCTTTGAAGCGTTCTGTCAAGGCTGGTCCCAGACTTATAATACCTGCGCGTGAGGAGATTGAAGCTCTGTTGACTGGGAGAAAGCTAACAACTATAGTGTTCTTCCTAGATGAAACATTTGAAGAAATTACATATGACATGTCAACCACAGTTGCCGATGCTGTTGAGGAACTTGCAGGGCTCATTAAACTGTCGACATACTCCAGCTTTAGTCTATTTGAATGTCGTAAAGTTGTTAATGGCTCCAAATCACCTGATCTTGGGAATGAGGAGTACATTGGGTTAGATAATAACAAATATATTGGGGACCTCCTGGCGGAATTTAAATCAGCAAAGGATCGAAGTAAGGGAGAAATCTTGCACTGTAAATTGATATTCAAGAAAAAGTTATTTCGTGAGTCAGATGAAGCTGTGACAGATCCAATGTTTGTGCAATTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGCAATTATCCTATTGGAAGGGACGATGCTGCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATTTGTTGGAACCCCTGAATCATGCACTGACTGGAATTCACTTCTGGAGCGTTTCTTGCCTAGACAAATTTCAATGACACGAGCAAAACGGGAATGGGAGTTAGACATTCTTTCTCGTTATCATTCATTGCAGCATATGACAAAAGATGATGCAAGACAACAATTTCTACGCATATTGAGAACACTTCCTTATGGCAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTCCTCCCTGGTCGAATAATTTTGGGAATTAATAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCTAAGGAATATTTGCACTCAGCTGAGTTGAAAGACATAATGCAATTTGGAAGCAGCAATACTGCAGTCTTTTTTAAAATGCGAGTTGCAGGTGTTCTCCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACATATCAATGATGTAATGCTGCGCCGCTATTCAAAAGCACGATCTGCTGCTGCTGCTGCTGCTACTGGTGGTGGTTCTTTCAATGGAGATAATTCTAATAATTTTAAGCCCCCTAATCTGGAACTATATGAGAAGCGCATTCAAGATTTATCAAACCTTGTTGTAGAATCTCAAAAAAATGCTGATCAATTGCTTGAAGAATTACGTGAGAAGCAAAAGCAAGAAGAGAAAATGCAAGAAGAATTGGATGGCTTGAAAGAATCCTGGAAAGCTGCTAAGCAAAATCTGGATGCAGTTACAAGTGATCGAGATAGACTTAGATCACTATGCAATGAAAAAGATAAGGCGCTACAGGCTGCAATTGTAGAGAAGAGGAATATGGAATCTAGGATGGCCATGTTAAGTAATGCAGTTGTAGAAAACACTACCAAAAAGGATCTTGCTGGAAATAACCAAGAGACTCAAAAGCTTGAAGATGAGCTAAGACTTTGTAAAGATGAGCTACATGCAGCTGAAGAAACTATCAGAAGTTTGAAAAGTGAAAAATTGATGTTGGAGCAAAAGTTGTATGCACTTGAGAAGAGGAATGCTGAAGAGATTGCTTCCTGTCAAAGGAAACTTGAGCAAGAACGCAAAGCTGTGAAGTCTGAAGTGTATGACCTTGAAAGAAAGCTGGAAGCGTGTAGGCAAGAATTACTGGCTGCCAAGTCTACTATTTCAGTCAAGGACTCTGAGTTGGCTGCATTGCAGAATAATCTGAAGGAACTTGAAGAATTGAGAGAAATGAGAGAGGACATCGATAGAAAAAATGAACAGACAGCTGCCATACTGAAAATGCAAGGGGCTCAACTTGCTGAAATGGAAGCACTTTATAAGGAAGAACAGGTTTTAAGGAAGCGCTATTTTAATATAATAGAAGATATGAAAGGCAAGATCAGAGTTTACTGCCGACTAAGGCCTCTTGGTGAAAAAGAGATCGCTGAGAAGGAAAGAGGAGTTCTTACTGCAGTAGATGAGTTTACAGTTGAATATCCATGGAAAGATGATAAGCTAAAGCAGTACATATATGACCGTGTTTTTGATGCTGATGCAACTCAAGAATGCGTGTTTGAGGATACAAGGTATTTGGTGCAGTCAGCTGTAGATGGTTATAATGTCTGCATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACATTTACAATCTATGGATGTGAAAACAACCCTGGACTTACCCCTCGTGCAATTGCAGAACTTTTTAGAATTTTAAAAAGAGATAATAACAAGTATTCTTTTTCATTGAAGGCATACATGGTAGAGTTGTATCAAGATACCCTTATAGATCTTCTGTTACCAAAAACTGGAAAACATTTTAAATTGGATATCAAGAAGGATTCGACGGGAATGGTAGTTGTGGAAAATGTAACAGTTATGTCAATTTCTACAATTGAAGAATTGAATAGTATTATACAAAGAGGATCAGAACGGCGCCATATATCAGGAACCCAAATGAATGATGAAAGCTCAAGATCTCATCTCATTCTATCTATTGTGATTGAAAGTACCAATCTTCAAAGTCAGTCAGTTGCTAGGGGAAAGCTGAGTTTTGTGGATCTTGCGGGTTCAGAAAGAGTGAAAAAATCAGGTTCCACAGGGAGTCAACTTAAAGAAGCTCAAAGCATTAACAAATCATTATCAGCACTTGGAGATGTTATTAGTGCTTTGTCTTCTGGTGGTCAACACACACCATACAGGAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTGAATGTTTCTCCAGCAGAATCAAGTTTGGATGAGACAAATAACTCTCTTATGTATGCATCACGAGTGAGATCCATTGTGAATGACCCCAGCAAAAATGTTTCTTCAAAAGAGATAGCACGGCTGAAGAAGTTGGTTGCATACTGGAAACAGCAAGCTGGTAGAGCACTTGAGTTTGAAGATTTAGAAGAAATTCAAGATGAACGACCAACCAAAGATAAGACAGATAGCACTAATGGCTCTAGGTAA 3819 0.3891 MTSDMPPSMAQNGRSSRYSFGSSNGNDDASLQNGAAVSNADDHDSDSSNFASPTPSMAIPTELAGAVPLISRFQVEGFLKLMQKQIQSAGKRGFFSKRSVGPQVQEKFTFEDMLSFQKDPIPTALLKINGDLVSRAIKLFQIILKYMGIDMSDRITPISLDERVELVGKLYKQSLKRSELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMSPSKDIGSYLSEYIHNIANGVTTDPEIQAIALNTLNALKRSVKAGPRLIIPAREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSSFSLFECRKVVNGSKSPDLGNEEYIGLDNNKYIGDLLAEFKSAKDRSKGEILHCKLIFKKKLFRESDEAVTDPMFVQLSYVQLQHDYILGNYPIGRDDAAQLSALQILAEIGFVGTPESCTDWNSLLERFLPRQISMTRAKREWELDILSRYHSLQHMTKDDARQQFLRILRTLPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELKDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAAAAATGGGSFNGDNSNNFKPPNLELYEKRIQDLSNLVVESQKNADQLLEELREKQKQEEKMQEELDGLKESWKAAKQNLDAVTSDRDRLRSLCNEKDKALQAAIVEKRNMESRMAMLSNAVVENTTKKDLAGNNQETQKLEDELRLCKDELHAAEETIRSLKSEKLMLEQKLYALEKRNAEEIASCQRKLEQERKAVKSEVYDLERKLEACRQELLAAKSTISVKDSELAALQNNLKELEELREMREDIDRKNEQTAAILKMQGAQLAEMEALYKEEQVLRKRYFNIIEDMKGKIRVYCRLRPLGEKEIAEKERGVLTAVDEFTVEYPWKDDKLKQYIYDRVFDADATQECVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGCENNPGLTPRAIAELFRILKRDNNKYSFSLKAYMVELYQDTLIDLLLPKTGKHFKLDIKKDSTGMVVVENVTVMSISTIEELNSIIQRGSERRHISGTQMNDESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISALSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESSLDETNNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKQQAGRALEFEDLEEIQDERPTKDKTDSTNGSR* 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0448 1272 SUPERFAMILY PH domain-like 500 588 - -
Apr3g0448 1272 CDD FERM_C_KCBP 497 599 - -
Apr3g0448 1272 CDD FERM_B-lobe 395 493 IPR019748 -
Apr3g0448 1272 MobiDBLite consensus disorder prediction 1250 1266 - -
Apr3g0448 1272 Gene3D Kinesin motor domain 837 1217 IPR036961 -
Apr3g0448 1272 Pfam FERM central domain 386 500 IPR019748 -
Apr3g0448 1272 Gene3D - 392 493 IPR014352 -
Apr3g0448 1272 ProSiteProfiles Kinesin motor domain profile. 895 1216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0448 1272 CDD KISc_C_terminal 893 1218 - -
Apr3g0448 1272 PRINTS Kinesin heavy chain signature 967 988 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0448 1272 PRINTS Kinesin heavy chain signature 1086 1103 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0448 1272 PRINTS Kinesin heavy chain signature 1117 1135 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0448 1272 PRINTS Kinesin heavy chain signature 1166 1187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0448 1272 MobiDBLite consensus disorder prediction 1250 1272 - -
Apr3g0448 1272 SMART MyTH4_1 116 275 IPR000857 GO:0005856
Apr3g0448 1272 Gene3D - 498 606 IPR011993 -
Apr3g0448 1272 ProSiteProfiles MyTH4 domain profile. 116 275 IPR000857 GO:0005856
Apr3g0448 1272 Coils Coil 731 779 - -
Apr3g0448 1272 Pfam MyTH4 domain 169 273 IPR000857 GO:0005856
Apr3g0448 1272 Coils Coil 701 721 - -
Apr3g0448 1272 SMART kinesin_4 893 1224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0448 1272 Coils Coil 788 815 - -
Apr3g0448 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 895 1243 IPR027417 -
Apr3g0448 1272 Pfam Kinesin motor domain 901 1216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr3g0448 1272 SUPERFAMILY Second domain of FERM 378 495 IPR035963 -
Apr3g0448 1272 ProSiteProfiles FERM domain profile. 280 594 IPR000299 GO:0005856
Apr3g0448 1272 Coils Coil 823 860 - -
Apr3g0448 1272 Gene3D - 1219 1267 - -
Apr3g0448 1272 Gene3D MyTH4 domain 95 277 IPR038185 -
Apr3g0448 1272 PANTHER KINESIN-RELATED 621 1272 IPR027640 GO:0003777|GO:0007018
Apr3g0448 1272 ProSitePatterns Kinesin motor domain signature. 1116 1127 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr3g0448 1272 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 621 1272 - -
Apr3g0448 1272 SMART B41_5 276 500 IPR019749 -
Apr3g0448 1272 Coils Coil 624 679 - -
Apr3g0448 1272 MobiDBLite consensus disorder prediction 1 54 - -
Apr3g0448 1272 Gene3D - 279 383 - -
Apr3g0448 1272 SUPERFAMILY Prismane protein-like 838 899 IPR011254 GO:0003824|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0448 Apr-Chr3 9046962 9068006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0448 51 1267 Calmodulin-binding Proteins AT5G65930 74.038 0.0 1825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0448 - - gmx:100807481 2117.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0448 3 9046962 9068006 Apr3g0448 3 9046962 9068006 ECH