Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0442 ATGACCCTTCCCACTGATTCATCACCACCACCTGAATCCACCACTACCAACGGCGTCGCCACCTCCTCAGAGGAAAACCCACAAGGACAGCCACCGTCGTTTCCAACTCCGCCGCAAGAACTACGAGTCCCAATATGGTGGCCAGAAGAGGGCAACCTGAGCATGGAATGGATCGAGAACCTGATGTCATGCTTCGATTGGTGTTCTCGGAACCTTCCTCCCTCCGAGTTCCATTCCGTTCTCCCCGTCAACGTCTTCGACTCTCTCATCCTCATCGCTTCCAAGATGCTCCACAAGGAACCTAATTGTGTCACCATAGACCCCTTTCGCCCTAGCCCCGATTCCGCGGCCGCCTCCGTCATCGTCGTCGGCGACGTTCATGGCCAATTGCATGATCTGATTTTCCTCCTCCATGATGCCGGTTTTCCCTCCCAAGATCGAATTTTCGTCTTCAACGGCGATTATGTGGATCGCGGCGCTTGGGGCCTTGAAACTTTCTTGCTCTTGTTAGCTTGGAAGGTATTCATGCCACATAACATATATTTGCTACGAGGGAATCATGAATCTAAATATTGTACGTCAGTCTACGGTTTTGAAAAAGAAGTAATGGTGAAGTATGGTGATAAAGGTAAGCATGTGTACCGGAAATGTTTGGGATGCTTTGAAGGTCTCCCTTTGGCTTCTATTATAGCAGGGTGTGTATACACAGCTCATGGAGGACTTTTCCGCAGTGTAACAGTGACACCTTCAAAGAGATTAAAAGGAAAGAAGAATCGTAAGATTAATGTTAATCATGATAGCAAAATTCTTTCCCTTGGTTCCTTGGAAGAATTGTCTAAGGCTCGGCGATCAGTTCTGGATCCTCCTTGGGAAGGCTCAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCATCAAAAACTCCCGGTCTTGCTCCAAACAAAGAAAGGGGTATTGGCTTGTTGTGGGGTCCTGACTGCACTGAAGAATTTTTGAAGAAGTACCAATTGAAGTTGATCATCAGGTCACATGAAGGTCCTGATGCTAGGGAAAAAAGGGATGGTTTGGATGGAATGGCTGAAGGTTACACTATTGATCATATTGTGGATTCTGGAAAGCTGGTCACCCTGTTTAGTGCTCCAGATTACCCACAATTTCAGGCAACAAAGGAGAGGTATAACAACAAAGGTGCATACGTTGTCCTTGAAGCCCCGAATTTTGACAATCCTATATTTCATGGATTTTCAGCCGTTTCCCCAAGGCCGAAGGCGAATGCCTATTACGATTATGAAGAGGTGATAGACTCCGACGAAGAATTGGACTTGGCCTCCATGGTAACTTCCTGA 1347 0.4684 MTLPTDSSPPPESTTTNGVATSSEENPQGQPPSFPTPPQELRVPIWWPEEGNLSMEWIENLMSCFDWCSRNLPPSEFHSVLPVNVFDSLILIASKMLHKEPNCVTIDPFRPSPDSAAASVIVVGDVHGQLHDLIFLLHDAGFPSQDRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPHNIYLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVTPSKRLKGKKNRKINVNHDSKILSLGSLEELSKARRSVLDPPWEGSNLIPGDVLWSDPSKTPGLAPNKERGIGLLWGPDCTEEFLKKYQLKLIIRSHEGPDAREKRDGLDGMAEGYTIDHIVDSGKLVTLFSAPDYPQFQATKERYNNKGAYVVLEAPNFDNPIFHGFSAVSPRPKANAYYDYEEVIDSDEELDLASMVTS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0442 448 ProSitePatterns Serine/threonine specific protein phosphatases signature. 183 188 IPR006186 GO:0016787
Apr3g0442 448 CDD MPP_PP7 47 429 IPR041754 -
Apr3g0442 448 MobiDBLite consensus disorder prediction 1 41 - -
Apr3g0442 448 PRINTS Serine/threonine phosphatase family signature 119 146 IPR006186 GO:0016787
Apr3g0442 448 PRINTS Serine/threonine phosphatase family signature 149 176 IPR006186 GO:0016787
Apr3g0442 448 PRINTS Serine/threonine phosphatase family signature 182 206 IPR006186 GO:0016787
Apr3g0442 448 PRINTS Serine/threonine phosphatase family signature 219 245 IPR006186 GO:0016787
Apr3g0442 448 PRINTS Serine/threonine phosphatase family signature 279 306 IPR006186 GO:0016787
Apr3g0442 448 PRINTS Serine/threonine phosphatase family signature 373 389 IPR006186 GO:0016787
Apr3g0442 448 Gene3D - 74 440 IPR029052 -
Apr3g0442 448 Pfam Calcineurin-like phosphoesterase 119 347 IPR004843 GO:0016787
Apr3g0442 448 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 22 445 - -
Apr3g0442 448 SUPERFAMILY Metallo-dependent phosphatases 76 423 IPR029052 -
Apr3g0442 448 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 22 445 - -
Apr3g0442 448 SMART pp2a_7 81 419 IPR006186 GO:0016787
Apr3g0442 448 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0442 Apr-Chr3 8878121 8893797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0442 44 339 Calmodulin-binding Proteins AT5G63870 70.707 1.44e-155 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0442 K04460 - gmx:100810695 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0442 3 8878121 8893797 Apr3g0442 3 8878121 8893797 ECH