Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0432 ATGACTCGCACACTCAGAATCCTCCAATCCACGGCGGCGCCACCACCGGAAGCTGCCTCCGTGGAGTCAGACTTCGTGGTGATCCTAGCAGCGCTCCTCTGCGCCCTTGTATGCGTGGTTGGTCTCATCGCCATCGCGCGCTGCGCCTGGCTCCGCCGAGGCCCCGCCGCCGCTGGAACCTCGCCGGCGATGGCACTCGCCAACAAAGGCCTCAAAAAGAAGGTGCTGAACTCGCTTCCCAAGTTCACCTACGTCGACGAGGGTAGCCGCAGCAAGTTGCCGGTGGTCTCGTCGGAGTGCGCGATTTGCCTGACGGAGTTCGCCGCCGGCGACGAGGTTCGCGTGTTGCCGCAGTGCGGCCACGGGTTCCACGTGGCGTGCATAGACACGTGGCTCGCGTCAAACTCCTCGTGCCCTTCGTGCCGCGCCCCCTTCGCCGTCCCGCTGTGCCAGAAGTGCGGGCAGTTCCCGGCTGTGGCCGCGGCCGCCGGTGAATCGGAAGCTAAGTCCGGTTGTGTCGACAATGCCGATAACTCGGCTAATGCTAATCATAATATTATTATTACCAACGGCTTCAGTAATTATGGTTTCTTGCCTTGA 600 0.6183 MTRTLRILQSTAAPPPEAASVESDFVVILAALLCALVCVVGLIAIARCAWLRRGPAAAGTSPAMALANKGLKKKVLNSLPKFTYVDEGSRSKLPVVSSECAICLTEFAAGDEVRVLPQCGHGFHVACIDTWLASNSSCPSCRAPFAVPLCQKCGQFPAVAAAAGESEAKSGCVDNADNSANANHNIIITNGFSNYGFLP* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0432 199 Pfam Ring finger domain 99 142 IPR001841 -
Apr3g0432 199 SUPERFAMILY RING/U-box 75 148 - -
Apr3g0432 199 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Apr3g0432 199 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 188 - -
Apr3g0432 199 SMART FANCL_C_2 96 150 - -
Apr3g0432 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 147 IPR013083 -
Apr3g0432 199 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 188 - -
Apr3g0432 199 SMART ring_2 100 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0432 Apr-Chr3 8604370 8605186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0432 1 153 C3H Transcription Factor Family AT1G20823 57.485 2.44e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0432 - - gmx:100786769 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0285 7 8176766 8177814 Apr3g0432 3 8604370 8605186 PCT