Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0428 ATGGTTGACATAATTGATCTTACAGATGCACCTCCATCACCACCTAGGTCATCTAATACAACAAAAGTTCTCAAATTTGCTGATATTTCTGTTAAAAAATATCAATTTAAGAAAAATCCTATATCCTCAAGGGCTTGTGCAAAATCCAACTCACATCGCTGTAGCCAGCAACAAACTACTCCATGTTCATCCTTGAAATATACCTATGAGCCATCTCATATTGCTTCTAGGTTTCAACTAGGCGTTCATGATGAAAGGATTGCTACTGTACCTGCACCTGTACCTGAATCAAACACATACCTATTTCCTCAAGGAGCTAGGCTCAATGAGCTTTGGAGTCAAACAGAGCATGAGTTATTTCTAAGGGGAATCATCAAGTATGGAAGAGGGCATTGGAGTGAAATTGCTAAACACTTTTTACCGAACAAAACAGCACAAGAAATTCAAAGTTATGCTACTAGCTTCTTCACAAACCTACCATCCGCACATCATGAGGACTATTGTACAAGGAAACAAACCTTCTTTACAAATAGCCTCATGCCTAGAGACAAGATGAGTGCATCTCCCTCTAATTCCATGCCTATGATTGATAATAAGTCTCAACAAACTCTCATGCTTTTTCCAGAGGAAGATTCTTTCTTATTGGTCCTGTCAAATGGAGAAGCTAGTAGCAACACTAAGACCGACATGTATGGGTCCCAAATGCAGACAGGTGGTGAAAACACTTCTATGAATGCTAGTGTTATTGGAGAAGTTGATTTAGAGTTGCGCTTAGGTAGATGCAAGTGA 789 0.3929 MVDIIDLTDAPPSPPRSSNTTKVLKFADISVKKYQFKKNPISSRACAKSNSHRCSQQQTTPCSSLKYTYEPSHIASRFQLGVHDERIATVPAPVPESNTYLFPQGARLNELWSQTEHELFLRGIIKYGRGHWSEIAKHFLPNKTAQEIQSYATSFFTNLPSAHHEDYCTRKQTFFTNSLMPRDKMSASPSNSMPMIDNKSQQTLMLFPEEDSFLLVLSNGEASSNTKTDMYGSQMQTGGENTSMNASVIGEVDLELRLGRCK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0428 262 Gene3D - 110 160 - -
Apr3g0428 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 160 IPR017930 -
Apr3g0428 262 SMART sant 108 158 IPR001005 -
Apr3g0428 262 Pfam Myb-like DNA-binding domain 112 151 IPR001005 -
Apr3g0428 262 ProSiteProfiles Myb-like domain profile. 112 156 IPR001005 -
Apr3g0428 262 MobiDBLite consensus disorder prediction 1 20 - -
Apr3g0428 262 CDD SANT 112 156 IPR001005 -
Apr3g0428 262 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 19 259 - -
Apr3g0428 262 ProSiteProfiles SANT domain profile. 112 160 IPR017884 -
Apr3g0428 262 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 19 259 - -
Apr3g0428 262 SUPERFAMILY Homeodomain-like 112 159 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0428 Apr-Chr3 8507159 8508147 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr3g0428 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0428 - - gmx:102665898 252.292