Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0426 ATGATTATTGGAGTTTGGATTGTGGTGTTGATGATTCTCTCAAATGGGTTATCTACAACTGGGGTTGTTTTGGATAATTCCACAATACCTGCTTTTGTAAATGTTGGAGTTCTATACTCTTTCAATACCAGTGTTGGTAGAATTGTGAAAATTGCTGTAGAAGCTGCAGTTGAAGATGTAAATTCTGATCCATCTATTCTTGGTAAAACTAAGTTGAAGGTCTCACTGCAGGAAGATTCTAAATACACAGGCTTTTTGAGCATTGCTGAGGTATTGCAACTCATGGCAACACACACTGTGGCTATAATTGGCCCCCAGACCTCTACAACAGCTCATGTCATATCTCACATAGCAAATGAGCTACAAGTTCCTCTTCTATCATTTTCAGCCACTGACCCTACCCTTTCTTCACTTCAATTCCCATTCTTTATCAGAACTGCTTTTAGCGACATTTATCAAATGACTGCAATAGCAGACTTTGTAAACCACTTTGGATGGAGGGAGGTCATTGCAGTTTATGGTGATGACGATCACGGGAGGAATGGAATTGGTGCATTAGGGGATAAGCTGGCTGAGAGACGCTGCAAGATATCATTTAAAGCACCTATGAGTGCTGAGGCAACTAGGGAGGAGATCACTGATGTGCTTGTTCAAGTAGCCCTCGCTGAATCCCGGGTTATAGTTCTTCACTCAAGTACTACTTGGGGCCCAAAAGTGTTAAGTGTCGCAAAGTCTTTAGGAATGATGGAAAATGGGTATGTTTGGATTGCAACTAATTTTCTGTCTACTCGGTTGGATATAGATAGTCCTCTATCTTCAGATGTAACAGATGACATTCAAGGAGTCATTACACTTCGTATGTATATACCAGATTCAAAGCTCAAGAAATGGTTTGTTTCTAAGTGGAAAAACTTGACTATTGGAAAGACTGCTAATGGTTCCCTTGGTTTGAGTACTTATGGTATCTTTGCATATGATACTGTTTATGTGCTTGCTCATGCACTTGAGGCATTTTTCAAACAAGGCAACCAAATCACTTTTTCAAATGATCCAAAGTTATCTGAACTACGTGGGGACAACATGCATCTTGATGCTGTGAAAATCTTCAATGAAGGGAATCTGTTGCGTAAAAGTATTTATGAGGTTAACATGACTGGTGTATCAGGTCTGTTTAAGTATACATCTGATGGAAACCTTGTTAATCCAGCATATGAAATCATCAATGTAATTGGATCAGGCACTCGGAGGATTGGTTATTGGTCCAATTACACTGGTTTATCTATTGTTCCTCCAAAATCACTGTATTCAAAGCCACCTAACCGTTCCAGTTCAAGCCAAAAGCTACTCCCTGTGTTTTGGCCAGGAGAAACAACTCAAAAGCCTCGTGGTTGGGTGTTTCCAAACAATGGAAGGATGTTAAAAATTGGAGTGCCAAAAAGAGTTAGTTACCGTGAATTCATTTCTCAAGTACAAGGCACTGACATGTTCAAGGGATTCTGCATTGATGTATTTCTTTCTGCAGTGAACTTGTTGCCCTATGCTGTCCCTTATAAATTTATTTCATATGGGGATGGTTACAGCAATCCTAGTAACACTGAGCTTGTCCGTCTGATAACGGCGGGTGTCTTTGATGCTGCAGTAGGTGACATTACAATTACTACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTCTAGTAGTTGTAGCATCAGTTAAGAAGACAGATTCCAATGCTTGGGCATTTTTAACACCGTTCACACCAAAGATGTGGACTGTCACGGCTGTCTTTTTCCTACTAGTGGGAGCTGTTGTCTGGATTTTAGAGCATAGGCTGAATGATGATTTTAGGGGACCTCCCAAGAAACAAGTGGTCACAATTTTGTGGTTTAGTTTTTCAACTATGTTTTTTGCTCACAGGGAAAATACTGTGAGCACTCTTGGTCGCTTTGTGCTGCTTATCTGGTTATTTGTAGTTCTTATTATTAATTCAAGTTACACTGCAAGCCTGACTTCAATCCTCACAGTGCAACAACTTTCTTCACCTGTTAAAGGCATTGAAAGTTTAGTAAACAGCAAAGAGCCTATTGGCTATTTGCAGGGTTCTTTTACTCGAACTTATTTGATTGAGGAAATTGGTATTGATGAATCCAGACTAGTTCCTCTTAAAACAGCAGAAGAAACCACAGAAGCACTGGAAAAAGGTCCACAAAAGGGTGGTGTTGCTGCATATGTTGATGAACGTGCTTACATCGAGCTCTTCCTTTCTAGCCGCTGTGATTTTAGTGTTGTAGGTCAAGAGTTCACCAGAAACGGTTGGGGATTTGCCTTTCCGCGAGACTCACCATTAGCAGTTGACCTCTCAACTGCCATATTGGAGTTGGCAGAGAATGGTGATCTACAAAGGATCCATGACAAATGGCTTTTGAACAGTGCTTGCTTATCACAAGGTGCCAAGCTTGAAGTGGACAGACTCAATCTGAGAAGCTTTTGGGGCCTCTATTTAGTGTGTGGATTGGCATGTGTGCTTGCTCTCGTCATATATCTTATTCAGACCATGAGGCAGTACCATAAGCACTGTCCTGAGGAAATTGAATCTTCTGCTTCTGTTGGGCAAGGCTTAGGATCTTCACGTTTGAAGACATTCCTTTCATTTGTTGATGAAAAGGAAGAGATAGTTAAGAGCCGGTCCAAGAGAAAGAAAATGGAGGGCATATCATACAGAAGCACAAGTGAGGTTGGATCCTCCATCTCCTCCAACAAAAGATATTCTCAGTCATCATCAAACATTATTGATTCAGCTAATGAAACCTAA 2829 0.4065 MIIGVWIVVLMILSNGLSTTGVVLDNSTIPAFVNVGVLYSFNTSVGRIVKIAVEAAVEDVNSDPSILGKTKLKVSLQEDSKYTGFLSIAEVLQLMATHTVAIIGPQTSTTAHVISHIANELQVPLLSFSATDPTLSSLQFPFFIRTAFSDIYQMTAIADFVNHFGWREVIAVYGDDDHGRNGIGALGDKLAERRCKISFKAPMSAEATREEITDVLVQVALAESRVIVLHSSTTWGPKVLSVAKSLGMMENGYVWIATNFLSTRLDIDSPLSSDVTDDIQGVITLRMYIPDSKLKKWFVSKWKNLTIGKTANGSLGLSTYGIFAYDTVYVLAHALEAFFKQGNQITFSNDPKLSELRGDNMHLDAVKIFNEGNLLRKSIYEVNMTGVSGLFKYTSDGNLVNPAYEIINVIGSGTRRIGYWSNYTGLSIVPPKSLYSKPPNRSSSSQKLLPVFWPGETTQKPRGWVFPNNGRMLKIGVPKRVSYREFISQVQGTDMFKGFCIDVFLSAVNLLPYAVPYKFISYGDGYSNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPKMWTVTAVFFLLVGAVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIESLVNSKEPIGYLQGSFTRTYLIEEIGIDESRLVPLKTAEETTEALEKGPQKGGVAAYVDERAYIELFLSSRCDFSVVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLNSACLSQGAKLEVDRLNLRSFWGLYLVCGLACVLALVIYLIQTMRQYHKHCPEEIESSASVGQGLGSSRLKTFLSFVDEKEEIVKSRSKRKKMEGISYRSTSEVGSSISSNKRYSQSSSNIIDSANET* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0426 942 Gene3D - 51 401 - -
Apr3g0426 942 MobiDBLite consensus disorder prediction 897 911 - -
Apr3g0426 942 Pfam Bacterial extracellular solute-binding proteins, family 3 530 813 IPR001638 -
Apr3g0426 942 Gene3D - 465 583 - -
Apr3g0426 942 CDD PBP1_GABAb_receptor_plant 34 430 IPR044440 -
Apr3g0426 942 MobiDBLite consensus disorder prediction 913 942 - -
Apr3g0426 942 Pfam Ligand-gated ion channel 814 846 IPR001320 GO:0015276|GO:0016020
Apr3g0426 942 Pfam Receptor family ligand binding region 50 411 IPR001828 -
Apr3g0426 942 Gene3D - 584 712 - -
Apr3g0426 942 CDD GluR_Plant 471 813 - -
Apr3g0426 942 SUPERFAMILY Periplasmic binding protein-like II 448 815 - -
Apr3g0426 942 Gene3D - 149 426 - -
Apr3g0426 942 Gene3D - 780 812 - -
Apr3g0426 942 Gene3D - 729 779 - -
Apr3g0426 942 SUPERFAMILY Periplasmic binding protein-like I 30 465 IPR028082 -
Apr3g0426 942 PIRSF IGluLR_plant 2 941 IPR017103 -
Apr3g0426 942 MobiDBLite consensus disorder prediction 897 942 - -
Apr3g0426 942 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 934 - -
Apr3g0426 942 PANTHER GLUTAMATE RECEPTOR 11 934 - -
Apr3g0426 942 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 46 62 - -
Apr3g0426 942 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 107 135 - -
Apr3g0426 942 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 324 336 - -
Apr3g0426 942 SMART GluR_14 474 815 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0426 Apr-Chr3 8411584 8416771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0426 6 918 Ion Channels AT3G51480 59.190 0.0 1161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0426 K05387 - gmx:100788917 1669.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0279 7 8121660 8126834 Apr3g0426 3 8411584 8416771 PCT