Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0423 ATGTCGTGTTCTTCTTCATCTGGGTCTGAAGAAGACGATGAGGGGTTTGATTCCTATCGGAAAGGAGGGTACCACGCCGTCAGGGTCGGCGATCAGTTCGCTGGCGGCAGGTACATAGCGCAAAGGAAACTGGGTTGGGGTCAGTTTTCAACCGTTTGGCTTGCCTATGATACTACCACATCAACATATGTTGCCCTCAAGTTCCAGAAAAGTGCAGCCCAATTTGCTCAGGCTGCCCTTCATGAGATTGATGTTCTTTCATCCCTTGCTGATGGTGCTGCTATGAATTCAAAATGTGTTGTCCAATTGATTGACCACTTTAAGCACACAGGTCCTAATGGCCAGCACCTTTGCATGGTGCTGGAATTTCTTGGAGATAGCTTGCTCCGTCTAATCAAATATAGCCGCTATAAAGGCCTTCCAATGGATAAAGTTAGGGAGATTTGCAAATGCATTTTGATTGGTTTGGATTATTTGCATAGAGAACATGGTATTATCCATACAGACCTAAAACCAGAAAATGTTCTTCTGGTTTCTACCATTGATCCTGCCAAAGACCCTCTTAGATCTGGACTATCCCCAATATTAGAGAGGCCTGAGGGAAATATAAATGGTGGAGTTACAAGTCTTATTGAGAAAAAGTTGAAAAGGAGAGCAAGGAGGGCAGTTGCTAAAATATCTGGAAGAACTGCTTCAATAGGAGGAACAGAAGCGCTAAAATCTGATAGAAATATTGATGGGATTGATGTGAGATGCAAGGTCGTTGATTTTGGAAATGCATGTTGGGCTGATAAGCAGTTTGCTGAAGAAATTCAGACAAGACAATACAGAGCTCCTGAAGTAATACTCCAGGCTGGTTATTCCTTCTCTGTTGACATGTGGTCTTTTGCTTGTATTGCTTTTGAGCTTGCCACTGGTGATATGTTGTTTACACCCAAGGTTGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCTCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGATTGCCACGGCTGGAGCAAAGTCCAAGGATTTCTTTGACAGACACGGGGATCTCAAAAGGATTCGAAGACTAAAGTTTTGGCCACTTAACAAATTGTTGGTTGATAGATATAAATTTGCAGAGAGTGATGCTCATGAATTTTCTGAGTTTCTTTTACCACTTCTAGATTTTGCGCCTGAGAAGCGGCCAACTGCGCAGCAGTGCCTGCAACATCCATGGTTCAAGGGCATGGAGTCTACTCCAGATGAAATGGGAAATGAATCTAGTGTGGAAAATGTGGATGTTGGGATGAGCAACCTTAAAATCAAGGTGGGAAAGTGA 1335 0.4352 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTTTSTYVALKFQKSAAQFAQAALHEIDVLSSLADGAAMNSKCVVQLIDHFKHTGPNGQHLCMVLEFLGDSLLRLIKYSRYKGLPMDKVREICKCILIGLDYLHREHGIIHTDLKPENVLLVSTIDPAKDPLRSGLSPILERPEGNINGGVTSLIEKKLKRRARRAVAKISGRTASIGGTEALKSDRNIDGIDVRCKVVDFGNACWADKQFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKIATAGAKSKDFFDRHGDLKRIRRLKFWPLNKLLVDRYKFAESDAHEFSEFLLPLLDFAPEKRPTAQQCLQHPWFKGMESTPDEMGNESSVENVDVGMSNLKIKVGK* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0423 444 SUPERFAMILY Protein kinase-like (PK-like) 32 421 IPR011009 -
Apr3g0423 444 Pfam Protein kinase domain 251 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0423 444 Pfam Protein kinase domain 39 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0423 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Apr3g0423 444 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 444 - -
Apr3g0423 444 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Apr3g0423 444 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 444 - -
Apr3g0423 444 ProSiteProfiles Protein kinase domain profile. 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0423 444 CDD STKc_SRPK 27 412 - -
Apr3g0423 444 SMART serkin_6 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0423 444 Gene3D Transferase(Phosphotransferase) domain 1 92 412 - -
Apr3g0423 444 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0423 Apr-Chr3 8301313 8305930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0423 4 430 EF-hand Containing Proteins AT5G22840 50.520 7.56e-171 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Apr3g0423 Pkinase 2.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0423 K08832 - gmx:100811724 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0275 7 8093808 8097662 Apr3g0423 3 8301313 8305930 PCT