Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0418 ATGGGAAGTTTATTGCACATTTTTGAGTTCAATCAGGGGAGGATGGCCAAAAAAGTTCATGCCCATAAAAAAAGTAATGATGCCCTGGAAACTCCTCGAAGTAGTGTGGAGCTGCAAGTAGAAACATCTCAGGTCCACTGTCCTGAAGGAGAATTACCTTACACTTGTCAGGTAGAAGATGGCTGGTCAAAGAATTATAGTTACTCAAATGTTGTTTCAGTGGAAAAAATGAACAATGAGAAGTTATCCAAACAATCAGGAACAAGAAATAATGCACCAAGCCTTGTGGCAAGGTTGATGGGAATAGACACGATGCCATTACCATTAGACACTAAATCTGTTGTTCCATCAGATGAAAGCAAACATGAAAATTTGGAGACGATGTATTCGAAAAAGGAAATGGATGGAAAGGGACTAGTTGGCAGGGGTTCCTCCAACTTTAATTCTTCTAGCCAGATGGAATTTGATTCACTTTGTCAAGACATTGTTCATGATGATGGATGGACACAAAAACCAAGGCCAAGGGAACATCCTCAGGAAAAGGAACTCAAGAAATTCAAGAAAGAATTTGAAGCATATAAAGCAGCAAGATTTAAGGAGTGTTCAGAGGTTGTTGAAATTGGAAGTGTTTCTAGGCAAATTCTTGGTCAAGAGAACCTGAGAAAGGAGAAGATGCAACATGATGCAAGGTCAAAGAGAGACAGCCACTCATTTCAAACAAAGCTACCAAATGGTGATGTGATGGAGTCAATATCAACTAAGAGAAGAGAATCCTTTCCTTCAAGGAGTAGAACACTAAGTAGAGATTTTGAGGAGTCTTTAGTGATGAAATCTAGAAGCAGATTAGATATATGTTCTTCTCCCGCCCAGATAGTTATATTGAAGCCTGGTTCTGATAGGATCTGCAATTGCAACCATGAAGAGAGTTGCATCAGTGTATCAGGCACTTTACAAGGGAAAAAAGGCATAGAAGATTTTCTTGAGGAAGTGAGAGAGCGGTTGAAGTGTGAAATGCAAGGGAAAACAGCCAAAAAGGGTTCTCTGATTAGAGCTAGTGAGCTTGGGACACCTTATAATGAAAAACCATATGTCCGCTCAGAATCAGCTAGATCATTCAAAAGTGAAATTCAGTTCAATGCACCAAGTTCCCCAGAATTTTTCAATAGAGATACCGGGAGATTCTTGTCAGAGAGGCTAAGAAATACTGTAAAAAGTAATGTTCATTTTGACATTCCTGCAGTGGCTTGTGGGAACTCAAGGTCATATACAGTAGACAATGGCAGAATTAGACTAAAGCAAAAAGAGGACACTATGAAGTGTGCAATTGACATGAACCAGTGGGAAATTTTAGAAGTGAAAAAAGAAATACAAACAGGTTCGTATAGACATAAACTAGATGACAATGTATTGCTCCACAAGGAGTTGTCCCCTAGGAACCTTGTGAGATCCTTGTCCGCTCCAGTATCAGGAACATCGTTTGGGAAGCTTCTTCTAGAGGACTGCCACTTGATAACTGGCGCTCATATCCAGAGGAAGCTGGAAGCTGTTGAAGAAATGCCTATTGATGTTAAGAAATGGAAAAAAGATAAATTTAGTATCAAAGAAAAAGTTTCCAATTTTAAACATATTCTTGGTCTAAGAGGGAAGCTGTTTGGCAAAAGGCTTCAGACGATAGTAGAATCACATGGCAATGAATATGGTCCCATTTTGAGAGATATCAGGAGTGGACCAACTGTTCTCATGAAGTATGGTGAGAGAAATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCTGTGCTCAAGAAGAAAATTGGAGACAGATTGATTATTTAAGTCCAATATCAACTCCAGATGTATCTTCACTAGATGATATTGTTATACCCAAGGTTTTTAGAGATATCAGCTCTGGTTTGATTGAACTAAGGAGGCAACTCAATCAACTTGATTCGGATGGCGTTGAGGACTTCACCATGAAGGAGGACCCTTTTGAGTCTGAATTAGTTCAATTGGATGATCCAGCAGAATCTTATGTAAGAGACCTGCTTGTTGCCTCTGGTTTGTACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACACTTGCAAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTAGAAGAATCTCACAAGATATTGGTCAAGGAGAATGAAATATTCATAAAGGATCAGAATAAATTAGAGCACAAGGTTTTACTTGACTTGTTAAATGAGGCTCTTTCGATTGTTCTTGGATCAACTTTGCCTTTGTCTAGATTCAGAAAGAAACTAAGCAATTCCTGCATGCAGCCTCCGCCATATGGAAAGGAACTACTGAAGTTAGTGTGGGACATTATCCGTGTTTCTTTATCTCCTCCATCTTATTTATTTCCTTGTTCATTTGATAGTTTGGTGGCACAAGACCTTGGACCCATCTCCTGGTATGGACTCATGAATGATCAGATCAATATATTGGAGACACAGATAGAATGTCTAATAACTGATGATTTGGTGGAAGAACTCACAAAGGATATGCTCTTAGGTATAGTGTGA 2568 0.3933 MGSLLHIFEFNQGRMAKKVHAHKKSNDALETPRSSVELQVETSQVHCPEGELPYTCQVEDGWSKNYSYSNVVSVEKMNNEKLSKQSGTRNNAPSLVARLMGIDTMPLPLDTKSVVPSDESKHENLETMYSKKEMDGKGLVGRGSSNFNSSSQMEFDSLCQDIVHDDGWTQKPRPREHPQEKELKKFKKEFEAYKAARFKECSEVVEIGSVSRQILGQENLRKEKMQHDARSKRDSHSFQTKLPNGDVMESISTKRRESFPSRSRTLSRDFEESLVMKSRSRLDICSSPAQIVILKPGSDRICNCNHEESCISVSGTLQGKKGIEDFLEEVRERLKCEMQGKTAKKGSLIRASELGTPYNEKPYVRSESARSFKSEIQFNAPSSPEFFNRDTGRFLSERLRNTVKSNVHFDIPAVACGNSRSYTVDNGRIRLKQKEDTMKCAIDMNQWEILEVKKEIQTGSYRHKLDDNVLLHKELSPRNLVRSLSAPVSGTSFGKLLLEDCHLITGAHIQRKLEAVEEMPIDVKKWKKDKFSIKEKVSNFKHILGLRGKLFGKRLQTIVESHGNEYGPILRDIRSGPTVLMKYGERNENSTEVPPSPASVCSCAQEENWRQIDYLSPISTPDVSSLDDIVIPKVFRDISSGLIELRRQLNQLDSDGVEDFTMKEDPFESELVQLDDPAESYVRDLLVASGLYFGSWDKSLLRGDTLAKPIGNSVFEEVEESHKILVKENEIFIKDQNKLEHKVLLDLLNEALSIVLGSTLPLSRFRKKLSNSCMQPPPYGKELLKLVWDIIRVSLSPPSYLFPCSFDSLVAQDLGPISWYGLMNDQINILETQIECLITDDLVEELTKDMLLGIV* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0418 855 MobiDBLite consensus disorder prediction 221 263 - -
Apr3g0418 855 MobiDBLite consensus disorder prediction 221 239 - -
Apr3g0418 855 Pfam DUF761-associated sequence motif 91 106 IPR032795 -
Apr3g0418 855 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 851 - -
Apr3g0418 855 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 851 - -
Apr3g0418 855 Pfam Domain of unknown function (DUF4378) 680 845 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0418 Apr-Chr3 8167493 8171314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0418 80 850 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.255 6.65e-143 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0418 - - gmx:100810825 1180.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0418 3 8167493 8171314 Apr3g0418 3 8167493 8171314 ECH
Apr7g0271 7 8062937 8068714 Apr3g0418 3 8167493 8171314 PCT