Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0408 ATGGCATACCTGAACCACACAACCTCGGTTTCTCCTCCTAAAACTGAACATGAAGCTGAGGAAGAGCATCCTAAGAGTCATGGTTCCTTCCCTTCTTGGCCTCATCACATAGAGAAAGTTTTTCCCATTTATGCCATGGGAATTCCCAACTCTGTCTTGGATTCTTCACTTCACCATTTGGATTGTCCTGATCCTATTTGGGAGGCTGTAAGAGAAGAAGCAGATTTGGAGGCTCAAAGGGAGCCAATTTTAAGTAGCTTCTTCTATGCAACTATTCTATCACATGATTGCTTAGAGCAAGCATTGGCTTTTGTTCTTGCCAATCGTCTCCAAAATCCTACTATTTTGGCAACTCAGCTGATGGATATATTTTGTAATGTGATGAAGCATGACAAAGGTATCCAGCAATCTATTCGCTTGGATATCCAGGCATTTAAAGATCGGGATCCAGCTTGTTTGTCATATTGCTCAGTTCTTTTATATGCGAAGGGTTACCATTCTTTGCAAGTATATCGAGTAGCTCATGCTTTGTGGGACCAGGGACGCAAAGTCTTGGCCTTGGCTTTGCATAGTCTAGTTAACGAGGCTTTTGGAGTTGATATACATCCTGGTGTTGTTATTGGTGAAACTACTGTTGTTGGAAACCGAGTTTCACTTATGCAAGGTGTAACTTTAGGAGGCACGGGAAAGGAAATAGGTAATCGCCATCCCAAAGTTGCCGAAGGTGTGCTAATTGGAGCTCATGCAACTATACTTGGAAATATAGTAATTGGTGAATGCGTGATGATAGCTGCTGGCTCCCTTGTGTTAAAAGAGGTCCCTCCTCACAGCATTGTGGCAGGTGTGCCAGCAAAGGTTATTGGACGACTGCATGAGCATTATCCATCTTTAACCATGAAGCAAGATGAGAACAAGCATCTCTCAAGCGAGTTTTTCAACAAACTAACAGAGATGAAGTCGCAGAAATTAAACGTAAATTGA 981 0.4241 MAYLNHTTSVSPPKTEHEAEEEHPKSHGSFPSWPHHIEKVFPIYAMGIPNSVLDSSLHHLDCPDPIWEAVREEADLEAQREPILSSFFYATILSHDCLEQALAFVLANRLQNPTILATQLMDIFCNVMKHDKGIQQSIRLDIQAFKDRDPACLSYCSVLLYAKGYHSLQVYRVAHALWDQGRKVLALALHSLVNEAFGVDIHPGVVIGETTVVGNRVSLMQGVTLGGTGKEIGNRHPKVAEGVLIGAHATILGNIVIGECVMIAAGSLVLKEVPPHSIVAGVPAKVIGRLHEHYPSLTMKQDENKHLSSEFFNKLTEMKSQKLNVN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0408 326 SUPERFAMILY Trimeric LpxA-like enzymes 65 300 IPR011004 -
Apr3g0408 326 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 245 273 IPR018357 GO:0016740
Apr3g0408 326 CDD LbH_SAT 197 283 IPR045304 -
Apr3g0408 326 Gene3D serine acetyltransferase, domain 1 50 195 IPR042122 -
Apr3g0408 326 Pfam Bacterial transferase hexapeptide (six repeats) 237 269 IPR001451 -
Apr3g0408 326 MobiDBLite consensus disorder prediction 1 31 - -
Apr3g0408 326 SMART SATase_N_2_a 66 170 IPR010493 GO:0005737|GO:0006535|GO:0009001
Apr3g0408 326 MobiDBLite consensus disorder prediction 13 29 - -
Apr3g0408 326 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 15 314 - -
Apr3g0408 326 PANTHER SERINE ACETYLTRANSFERASE 15 314 - -
Apr3g0408 326 Pfam Serine acetyltransferase, N-terminal 66 169 IPR010493 GO:0005737|GO:0006535|GO:0009001
Apr3g0408 326 Gene3D Hexapeptide repeat proteins 196 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0408 Apr-Chr3 7929956 7934947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0408 37 317 Miscellaneous Gene Families AT2G17640 63.514 9.94e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0408 K00640 - gmx:100778586 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0408 3 7929956 7934947 Apr3g0408 3 7929956 7934947 ECH
Apr3g0408 3 7929956 7934947 Apr7g1785 7 25205001 25207264 PCT