Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0392 ATGGGTGTATCCCACAAATGGTTCAGAATTGTTCGTGCCAAGTTCCTCAGATCATCCAACAAAGACATAGTTCTCCCTCGCTCTAGCATTTCCACCAACCAATATGAAGAAGCAGCCATACTTGGGAATAAAACAACCACCGCGGAACACTACAATTTCCCCACACCAACAACTTCGCCAAACACCTTCACCCAGGAAGATGTCGCCGCAATTAAGATTCAAGCTTATTTCAGGGGACATCTTGCGAGACGAGCATATCGGGCTCTGAAAAGCTTGGTGAAGCTGCAAGCATTGGTTCGCGGGGTGTGGGTGAGGAGACAATCGCGTATAGCAATGCAGTGTATGCACGCACTTGTACGATTACAAGTCAGGGTTCGTTCTCGACAGCTTCTTGGTAGCTTCAATAAGGATTAA 414 0.471 MGVSHKWFRIVRAKFLRSSNKDIVLPRSSISTNQYEEAAILGNKTTTAEHYNFPTPTTSPNTFTQEDVAAIKIQAYFRGHLARRAYRALKSLVKLQALVRGVWVRRQSRIAMQCMHALVRLQVRVRSRQLLGSFNKD* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0392 137 PANTHER OS04G0561100 PROTEIN 3 132 - -
Apr3g0392 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 110 IPR027417 -
Apr3g0392 137 SMART iq_5 88 109 IPR000048 GO:0005515
Apr3g0392 137 SMART iq_5 65 87 IPR000048 GO:0005515
Apr3g0392 137 ProSiteProfiles IQ motif profile. 90 117 IPR000048 GO:0005515
Apr3g0392 137 Pfam IQ calmodulin-binding motif 90 107 IPR000048 GO:0005515
Apr3g0392 137 Pfam IQ calmodulin-binding motif 69 87 IPR000048 GO:0005515
Apr3g0392 137 Gene3D - 65 117 - -
Apr3g0392 137 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Apr3g0392 137 PANTHER IQ-DOMAIN 5-RELATED 3 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0392 Apr-Chr3 7687081 7687721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0392 1 132 IQD Protein Family AT3G51380 51.515 1.80e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0392 - - vun:114179724 171.785