Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0385 ATGCTATCAAGGTTGATGGACTTTCTGACTGCCTGCTGGCGCCGAAGATCCTCCGACAAGGGTTCCGATGTGTCGGGGCGGAAGGAGGGGTTGCTGTGGTACAAGGATGCCGGGCAGCACTTGTTTGGTGAATACTCAATGGCTGTTGTTCAGGCCAACAACTTGCTTGAGGATCAGAGCCAGCTTGAGTCTGGTCCTCTTAGCTTGCTTGATACTGGTCCTTATGGTACTTTTGTTGGCGTGTATGATGGTCACGGCGGACCCGAGACGTCGCGTTACATTTGTGATAATCTCTTCCAACATTTAAAACGATTTGCATCTGAGCAGAAGTCCATGTCTGTGGAGGTTATTCGAAAGGCGTACCAAGCCACGGAAGAAGGTTTTCTGTCATTGGTTACTAAACAGTGGCCTATGAATCCCCAAATTGCTGCTGTGGGATCTTGTTGTTTGGTTGGTGTGATTTGTGGTGGTGCCCTATATATTGCTAACCTTGGTGATTCTCGTGCTGTGCTTGGGCGGGTTGTCAGAGCAACTGGGGATGTTTTGGCAATCCAGCTTTCATCGGAGCATAATGTGGGCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCAGATGACTCGAAAATTGTGGTTCTAAAGCACAACGTTTGGCGGGTAAAGGGTCTGATACAGGTTTCTAGATCCATTGGTGATGTATACCTAAAAAAGGCAGAATTCAACAAGGAACCATTGTATGCCAAGTTTCGTCTTCGGGAAACTTTTAAAAGACCCATTTTGAGCTCTGATCCATCAATTTCCATTCATGAGCTTCAAGAACATGATCAATTTCTCATATTTGCCTCTGATGGTCTTTGGGAACACCTTAGCAATCAGAATGCTGTTGATATAGTTCAAAATCACCCGCACAATGGAATTGCTAGGAGGCTCATCAAAGCTGCTTTGCAGGAAGCAGCAAAAAAGAGAGAGATGAGGTACTCTGATTTGAAGAAAATCGATCGCGGTGTCCGCCGGCATTTCCATGATGACATCACTGTCGTAGTTGTATTTCTTGACTCCAATCTTGTCAGCAGAGCCAGCTCTGTAAGAGGTCCTCCATTATCAGTGAGAGGAGGCGGTGTTCCCCTACCTTCAAGAACTTTAGCTCCTGAACTTAGTTCAGTGTTCCTGATCTCTGTTCAAGTTTAA 1191 0.4584 MLSRLMDFLTACWRRRSSDKGSDVSGRKEGLLWYKDAGQHLFGEYSMAVVQANNLLEDQSQLESGPLSLLDTGPYGTFVGVYDGHGGPETSRYICDNLFQHLKRFASEQKSMSVEVIRKAYQATEEGFLSLVTKQWPMNPQIAAVGSCCLVGVICGGALYIANLGDSRAVLGRVVRATGDVLAIQLSSEHNVGIESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNKEPLYAKFRLRETFKRPILSSDPSISIHELQEHDQFLIFASDGLWEHLSNQNAVDIVQNHPHNGIARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSVRGPPLSVRGGGVPLPSRTLAPELSSVFLISVQV* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0385 396 ProSitePatterns PPM-type phosphatase domain signature. 78 86 IPR000222 GO:0043169
Apr3g0385 396 SUPERFAMILY PP2C-like 53 353 IPR036457 -
Apr3g0385 396 Gene3D - 29 362 IPR036457 -
Apr3g0385 396 ProSiteProfiles PPM-type phosphatase domain profile. 41 352 IPR001932 -
Apr3g0385 396 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 384 - -
Apr3g0385 396 Pfam Protein phosphatase 2C 77 321 IPR001932 -
Apr3g0385 396 CDD PP2Cc 76 352 IPR001932 -
Apr3g0385 396 SMART PP2C_4 36 350 IPR001932 -
Apr3g0385 396 PANTHER ALPHABET, ISOFORM E-RELATED 5 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0385 Apr-Chr3 7562310 7570050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0385 1 380 PP2C-type Phosphatase Gene Family AT3G51370 78.215 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0385 K01102 - gmx:100777920 734.561