Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0377 ATGCTGTCATCATCAACTACTAAAGGGGAATGCACCTGCAGCCGCAACAGGAAGACCCTCAACAACAGACACAGAGGTTGCTCTTCCTCTTCTTCCACATCGAAGCCACCAACTTCATCCTTTTCGCTTAAACAAAACAACAAAGCCATGGATGATGTGTGGGAAGACATAAACCTTGCATCCTTGAGTGACCAAAACAGTACCCAACACCCCATCACCACCACCGACCCACAAGGTGCGAATTTTCAAGACTTTCTGTCTCGACCCTTGACCAATTTCTCCGTAGCCATAGACCCTGCCACTGCTCTCAGTTTGAGCACGCGCCCTGAGCTCACACACAAGGACTTGCAATTAGCACAACCCCATCACAACCCTCCCTTAAAGGTTGATCCTTTTCAAAACCGTGCTCACTCATGTGCCTCTTTTGGGAATAACACTAAGAAATCTCTCCAACCTGATACCAACTCAGGGGACAGAAGGAATACTCGAATGATGAAGAATCGTGAATCTGCTGCGCGATCAAGAGCTTATATGTTTGAGTTGAAGCAAAAAGTTAAGCTCTTACAGGAAGAGAATGCGCGACTCAGAAGACAGCAGCAACGGTTGTGTGAAACCGCAGCCAATCAGCGGAAGAAGAAGGGCAATCTATATCGAGCATCCACAGCTCCATTTTAA 675 0.4711 MLSSSTTKGECTCSRNRKTLNNRHRGCSSSSSTSKPPTSSFSLKQNNKAMDDVWEDINLASLSDQNSTQHPITTTDPQGANFQDFLSRPLTNFSVAIDPATALSLSTRPELTHKDLQLAQPHHNPPLKVDPFQNRAHSCASFGNNTKKSLQPDTNSGDRRNTRMMKNRESAARSRAYMFELKQKVKLLQEENARLRRQQQRLCETAANQRKKKGNLYRASTAPF* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0377 224 PANTHER PROTEIN FD 28 224 - -
Apr3g0377 224 MobiDBLite consensus disorder prediction 137 166 - -
Apr3g0377 224 MobiDBLite consensus disorder prediction 1 47 - -
Apr3g0377 224 Coils Coil 178 205 - -
Apr3g0377 224 MobiDBLite consensus disorder prediction 1 16 - -
Apr3g0377 224 SUPERFAMILY Leucine zipper domain 159 205 IPR046347 GO:0003700|GO:0006355
Apr3g0377 224 SMART brlzneu 155 215 IPR004827 GO:0003700|GO:0006355
Apr3g0377 224 CDD bZIP_plant_BZIP46 159 209 - -
Apr3g0377 224 MobiDBLite consensus disorder prediction 23 47 - -
Apr3g0377 224 Gene3D - 158 213 - -
Apr3g0377 224 MobiDBLite consensus disorder prediction 137 158 - -
Apr3g0377 224 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 28 224 IPR043452 GO:0003700|GO:0045893
Apr3g0377 224 Pfam bZIP transcription factor 159 212 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0377 Apr-Chr3 7433612 7435028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0377 48 198 bZIP Transcription Factor Family AT5G44080 27.976 3.85e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr3g0377 bZIP_1 1.1e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0377 K14432 - gmx:102667912 189.889