Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0351 ATGTTCACAGAACCTTTTCCTACACCAATCTCCGCCGCCACTTTTCCCGGCAAAACCGTTTCTTCATCGCCGAGCCACGTCAAATTCCGGCCAGTAGTCTCCTTCGCCACCGCCGCCGAAGCTAACTCTACTTGGAAGGAAGAGCAACAAGCACAGAGACCGTATTTGAGCCCTAACAGCATGGCTTCGTGCACGACGCTTTACGAGATTCTTGGAATTGGAACCGCCGCGTCCGGCAAGGAAATCAAGGCGGCGTACCGGCGACTCGCGAGGGTTTGCCACCCGGACGTGGTGGCAATGGATCGGAAGGAATCGGCTGCGGGCGAGTTCATGAAGATCCATGCTGCCTACTGCACCCTATCGGATCCCGAGAAGCGTGCCAGCTATGATAGGAGGTTGTTCCAACATCAGCGACCGCTCGGGACGACGTCGTTTGGATTTTCCAGCTACACTCGTCGGAGTTGGGAAACGGACCAGTGTTGGTAG 486 0.5617 MFTEPFPTPISAATFPGKTVSSSPSHVKFRPVVSFATAAEANSTWKEEQQAQRPYLSPNSMASCTTLYEILGIGTAASGKEIKAAYRRLARVCHPDVVAMDRKESAAGEFMKIHAAYCTLSDPEKRASYDRRLFQHQRPLGTTSFGFSSYTRRSWETDQCW* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0351 161 Pfam DnaJ domain 67 130 IPR001623 -
Apr3g0351 161 Gene3D DnaJ domain 55 152 IPR036869 -
Apr3g0351 161 PRINTS DnaJ domain signature 68 86 IPR001623 -
Apr3g0351 161 PRINTS DnaJ domain signature 86 101 IPR001623 -
Apr3g0351 161 PRINTS DnaJ domain signature 105 125 IPR001623 -
Apr3g0351 161 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 22 161 - -
Apr3g0351 161 ProSiteProfiles dnaJ domain profile. 66 133 IPR001623 -
Apr3g0351 161 SUPERFAMILY Chaperone J-domain 37 129 IPR036869 -
Apr3g0351 161 CDD DnaJ 66 122 IPR001623 -
Apr3g0351 161 SMART dnaj_3 65 125 IPR001623 -
Apr3g0351 161 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 22 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0351 Apr-Chr3 6945557 6946042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0351 68 130 C2H2 Transcription Factor Family AT1G74250 43.939 1.24e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0351 - - gmx:100795760 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0351 3 6945557 6946042 Apr3g0351 3 6945557 6946042 ECH
Apr3g0351 3 6945557 6946042 Apr7g1099 7 17985579 17986735 ECH