Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0348 ATGGCTGAGTCGGTTCCATTTGCTGTTACTTCAAATCTGATTCACAGGTTGGATTCTGCAGATTTTCTTGAATTTGGACACATGTATGATGTGATGGAAGAGTTGGAAGCGCTTAAGAACACAATTGAATCTATCAATGACGTGCTCCTTGATGCTGACGATAAACAAGAACAAGCTCGTGTCAGAGTTTGGATCAAAAGGTTCAAAGACGTGCTTCATGGTGCAGATGACTTCTTTGATGACCTTGATGTTGAATTTATGAGACACAAATTGGATGCAGGTCAAGGAAAAGAAGTGAACAAGGTACTTCATTCCTTTTCATCTTCAAATCAAATTGATTTTCCCATTCAAATGGCTGAAAAAATTAAAGAAACACAAGAGAGTTTTAATGCTGTAGTAGAAGACATGCATAAATTGAATTTAAGTCCAAGAACTATGGTGGTTAAGCAAATTAATAGTGGATGGAGGGAAACTGGTTCTTTTGTGTTAGAATCTGATATCGTTGGAAGAAATGATAGTAAAAAGGAGATTGTAAGTCTCTTGAGACAATCAGATGAAAACCAAAAAGTTTCAGTGATTGTTATTGTTGGCATTGGTGGTTTGGGGAAAACAGCTCTTGCTCAGTTGGTGTATAATGACTTGGAAGTGCAGAGTTTTTTTGAAAAGCGAATGTGGGTGTGTGTCTCTGATAACTTTAATTTAAAAACTGTTGTGAGGAAAATATTAGAATCATTTACTGGTGGCCAAATTGAAGACAAGTTATCATTAGACAACTTGCAAAATAAGCTTCGTCAAAATTTAAGTGGTAAAAAATATTTGTTGGTCCTGGATGACAATTGGAGTGAAAGTAAAGAAGAATGGGCTGAATTGAAAACTCTTTTGATGTGTGGTGCTCAAGATAGTAAGATTTTAGTGACAACTCGCAGTGAAATTGTAGCAAAGACAATGATTGCTAGCACTTCCTATCCTCTGAATGTTTTGACTGAAGAAGAATCTTGGAGTTTGTTAAAGAAAATTGCATTTCAGGATGATACCAAAGGAGTGAATCAAAATCTAGAATCAATGGGTAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCACTATCAATTAAAACACTAGGAGGCCTATTACGAGGCCAAAAAGAAGAAAGTGAATGGGAAGATGTTTTATGTGGTGATTTCTGA 1185 0.3586 MAESVPFAVTSNLIHRLDSADFLEFGHMYDVMEELEALKNTIESINDVLLDADDKQEQARVRVWIKRFKDVLHGADDFFDDLDVEFMRHKLDAGQGKEVNKVLHSFSSSNQIDFPIQMAEKIKETQESFNAVVEDMHKLNLSPRTMVVKQINSGWRETGSFVLESDIVGRNDSKKEIVSLLRQSDENQKVSVIVIVGIGGLGKTALAQLVYNDLEVQSFFEKRMWVCVSDNFNLKTVVRKILESFTGGQIEDKLSLDNLQNKLRQNLSGKKYLLVLDDNWSESKEEWAELKTLLMCGAQDSKILVTTRSEIVAKTMIASTSYPLNVLTEEESWSLLKKIAFQDDTKGVNQNLESMGKEIAKKCKGVPLSIKTLGGLLRGQKEESEWEDVLCGDF* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0348 394 Gene3D - 153 321 IPR027417 -
Apr3g0348 394 Coils Coil 35 55 - -
Apr3g0348 394 Gene3D - 9 113 - -
Apr3g0348 394 PANTHER OS05G0414200 PROTEIN 35 386 - -
Apr3g0348 394 PRINTS Disease resistance protein signature 192 207 - -
Apr3g0348 394 PRINTS Disease resistance protein signature 266 280 - -
Apr3g0348 394 PRINTS Disease resistance protein signature 363 377 - -
Apr3g0348 394 Pfam Rx N-terminal domain 24 97 IPR041118 -
Apr3g0348 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 390 IPR027417 -
Apr3g0348 394 PANTHER DISEASE RESISTANCE PROTEIN RP 35 386 IPR044974 GO:0006952
Apr3g0348 394 Pfam NB-ARC domain 172 389 IPR002182 GO:0043531
Apr3g0348 394 Gene3D - 326 391 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0348 Apr-Chr3 6850862 6852046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0348 190 387 WRKY Transcription Factor Family AT5G45050 25.806 1.03e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0348 - - aprc:113871448 584.334