Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0331 ATGAAGCGCGCAAGGAAATCTAACAGGGTTTCGTGGGCTACTGGAGGTAACCTGTGTCAGGTAAAATTGTTCTTGTCTGAGGATTACCCTTCAAAAGTTGGCCAGAGAACGCAAGATCATCTACAGGCAAAGATATCATCAGTGTTACATTCAAGTATCAATGAACCTAATGATTTACCCCCGGGGTTTGAAAGCAGTCATTTTCTAACCCAATCGAAGGCTGAATTCTCCCACATTTCCCAGATCAAATGGGAACGCCCTCCACTGTTTGTCTTCAGTCCTCATTGGCGTGTTGCAGCTGGTGAAGAAAGTAAGGAGAAAGAGGATCAGAAGCTGAGAGAAGTGAGAGTGCTTGAAGCAGTTTACCCCCGTCTTTCTGCCATTCCGCCTAGCCCTTCTGTCTCTTTGGATGTAGAAGAGGAAGAATATGATGATACCATTACTCCTCTCATCCCTATCATACCCATTGAAGAGGAAGAGTTTACGGAATATGATGTGAACCCTCCCCTCAATGTGCAGTCGCAGAACACACTGCAATATATATCAGGAACAACCCCCATTGGTCCGGCCTCTAATGCCCCTTGTACTGTTTCCTCGGATGCCTGTGCAAAGCCCTTACCTGGGGTATCCTCCGGTTTGGAAGGAGACTTTGTAGCAGCCTCAGCTGTTGTAGCAACCATTATGAAGAGTAATGAGCAAGGACGCATGATTGACATGGATTTACTGGTTAAGATATTTAACGATCCAGAGATGATTGAGAAGCTAATTAATGAACATGGAACTACAGCTACTACTGTAAGTACTTCCGCAAATACTGTGGATATACCCACTTCTGGTATGAAACCTGCTATTCCATCAGGTCCATTGTCTACATCTGCACCTGATGTGTCGGCTTCTGGGACTACATCCACAAGCACAGTGGGTTTATTACCCTCTGGCTTGAAGCCTGCAACTCCCTCAGTTTCATTGTTAACTCCTACACCTGATAAACCAGCAACTTTGTCAGCGTCTGCAATTCCATCAGTTTCACTGACTTCTACACATGATAAAACAGCAACTGCATCAGTTCCTTTGTCAAGGCCTGTATCTGGTAAACCAGCATCTCCCTCAGTCTTATTGCCTACACATACACATACACCTGCACTTGCACCTGCACCTCATATGCACAGGCCTGTCAACCAAAGTATTCACCATATGTCAAGTGGAATGTCCCCTGCTTCAAATGCTCGTTCTCAGAAAGATACAGTTCTGGCATCTGGGCAAAAGCGAGCTGCATCATTGGCGTCCATATCTTCTAGTGAATTAAGCTCTGTCCCATTGCCACCTGCTACTGGTAACTTGCATGCTGTGAATCAGGCAAAATCCACTGCTAGTGCAATGCCTTATAAACTTAGTACAGGTTCAGCATTTGCTGTTAAGGATGCCAACTATTATAAAAACCTCATCAGGCAACACGGTGCGGATAAGCAAGATATGCAGGACTCACACTTAGGTAACCGACATAGTAACTTCCAAGATATGAAACTGGTACATAACATTAAACACGGAGAAGTGAAACACAAAATCCAGAAACCATGCATGTACTTTAAAAGCTCAAGGGGGTGCCGCAATGGTTCCAATTGCCCTTTTCAGCATGATGTTTCAGTTCAGTGGGGAGCTGGTAACGTCCTAGGGGCACAGAATGCAAAAAGATTGAAATTGGGACCAGAAATTTAG 1716 0.4476 MKRARKSNRVSWATGGNLCQVKLFLSEDYPSKVGQRTQDHLQAKISSVLHSSINEPNDLPPGFESSHFLTQSKAEFSHISQIKWERPPLFVFSPHWRVAAGEESKEKEDQKLREVRVLEAVYPRLSAIPPSPSVSLDVEEEEYDDTITPLIPIIPIEEEEFTEYDVNPPLNVQSQNTLQYISGTTPIGPASNAPCTVSSDACAKPLPGVSSGLEGDFVAASAVVATIMKSNEQGRMIDMDLLVKIFNDPEMIEKLINEHGTTATTVSTSANTVDIPTSGMKPAIPSGPLSTSAPDVSASGTTSTSTVGLLPSGLKPATPSVSLLTPTPDKPATLSASAIPSVSLTSTHDKTATASVPLSRPVSGKPASPSVLLPTHTHTPALAPAPHMHRPVNQSIHHMSSGMSPASNARSQKDTVLASGQKRAASLASISSSELSSVPLPPATGNLHAVNQAKSTASAMPYKLSTGSAFAVKDANYYKNLIRQHGADKQDMQDSHLGNRHSNFQDMKLVHNIKHGEVKHKIQKPCMYFKSSRGCRNGSNCPFQHDVSVQWGAGNVLGAQNAKRLKLGPEI* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0331 571 MobiDBLite consensus disorder prediction 281 420 - -
Apr3g0331 571 MobiDBLite consensus disorder prediction 394 420 - -
Apr3g0331 571 MobiDBLite consensus disorder prediction 318 358 - -
Apr3g0331 571 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 567 - -
Apr3g0331 571 ProSiteProfiles Zinc finger C3H1-type profile. 521 548 IPR000571 GO:0046872
Apr3g0331 571 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 567 - -
Apr3g0331 571 MobiDBLite consensus disorder prediction 290 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0331 Apr-Chr3 6647825 6657909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0331 81 163 Homeobox Transcription Factor Family AT4G02560 43.373 1.05e-07 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Apr3g0331 zf-CCCH 0.00015 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0331 - - gmx:102661587 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0331 3 6647825 6657909 Apr3g0331 3 6647825 6657909 ECH