Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0320 ATGTTCCCTCCTAGTCTATTAAATCAAGATACCCACACCATGGATTTGCTTCTGCAAGCGAAAACGGCAATGGAACCATTCCATACGACACTCTTGTTCATCATCCCACTTATGTTGTTTCTGTGTTTAGCGTCACGAAGCATTCGCAAAACGGCGCCGTATCCGCCAGGACCAAAAGGGTTACCCATCATAGGCAACATGAACATGATGGACCAGCTCACGCACCGTGGTCTTGCCAACCTAGCAAAGCAATACGGCGGCGTTTTTCACCTCCGAATGGGGTTCCTCCACATGGTTGCAATTTCAAACGCGGAAGCGGCGCGTCAAGTTCTCCAAATCCAAGACAACATCTTCTCTAACCGTCCTGCCACTATAGCCATAAGCTACCTCACTTACGACCGTGCTGACATGGCATTCGCTCACTACGGTCCATTTTGGCGCCAGATGCGTAAGATCTGCGTCATGAAACTCTTCAGTCGCAAACGCGCTGAGTCGTGGCAATCCGTTAGAGACGAAATTGACACCATAATCCGTTCCGTTACGGCGAACGTTGGGAACGCCGTTAACATTGGTGAACTCGTTTTTAATCTTACAAAGAACATTACTTACCGTGCGGCGTTTGGGTCAAATTCAACGGAAGGGCAAGAAGAGTTCATTTCGATACTTCAAGAGTTTTCGAAGCTGTTTGGGGCTTTTAATATTGCGGATTTCATTCCATATCTTGGGTGGGTTGATCCTCAGGGTCTTAAAAATAGACTCGTAAAGGCTCGTGGAGCGTTGGATAGTTTCATTGATAAGATTATTGATGAACATGTGGAGAAAAAGAGGAGTGGCAATAAGAACCATGCCTGTGATGAAGAGAGTGACATGGTTGATGAGTTGTTGAATTTTTACAGCGAAGAGGCTAAGCTGAATAATGAATCTGATGACCTGCAGAACTCAATTAAACTCACCAAGGATAACATCAAAGCCATCATCATGGACGTCATGTTCGGAGGTACCGAAACGGTGGCATCGGGAATCGAGTGGGCAATGGCAGAGCTAATGAGAAGCCCAGAAGACCTAAAGCGCGTGCAGCAAGAACTCGCTGACGTGGTAGGCTTGGAAAGGCGCGTGGAGGAATCGGACTTCGAGAAGCTCACCTTTCTAAAATGCGCCGTGAAGGAGACACTCCGCCTCCACCCACCGATTCCCCTTCTCCTACACGAGACGGCGGAGGACGCGGCGGTTTGCGGGTACTTTGTGCCGAAGGGGTCGCGCGTGATGATAAACACGTGGGCCATTGGGAGGGACAAGGAGTCGTGGGAGGAGCCTGAAGCGTTCAAGCCATCGCGGTTTCTAAAACCGGGTGTACCCGATTTCAAAGGGAACAACTTTGAGTTCATTCCATTCGGGTCGGGTCGAAGATCCTGCCCCGGAATGCAACTGGGTTTGTACACGCTGGAACTGGCGGTGGCTCTCTTGCTTCATTGCTTCACGTGGGAGTTACCCGATGGGATGAAACCCAGTGAGTTAGACACGAATGACGTGTTTGGACTCACCGCCCCGAGGGCGAGTCGACTCGTTGCCATTCCATCTAAGCGCGTTCTGTGTCCTCTCTAA 1602 0.4981 MFPPSLLNQDTHTMDLLLQAKTAMEPFHTTLLFIIPLMLFLCLASRSIRKTAPYPPGPKGLPIIGNMNMMDQLTHRGLANLAKQYGGVFHLRMGFLHMVAISNAEAARQVLQIQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKICVMKLFSRKRAESWQSVRDEIDTIIRSVTANVGNAVNIGELVFNLTKNITYRAAFGSNSTEGQEEFISILQEFSKLFGAFNIADFIPYLGWVDPQGLKNRLVKARGALDSFIDKIIDEHVEKKRSGNKNHACDEESDMVDELLNFYSEEAKLNNESDDLQNSIKLTKDNIKAIIMDVMFGGTETVASGIEWAMAELMRSPEDLKRVQQELADVVGLERRVEESDFEKLTFLKCAVKETLRLHPPIPLLLHETAEDAAVCGYFVPKGSRVMINTWAIGRDKESWEEPEAFKPSRFLKPGVPDFKGNNFEFIPFGSGRRSCPGMQLGLYTLELAVALLLHCFTWELPDGMKPSELDTNDVFGLTAPRASRLVAIPSKRVLCPL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0320 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Apr3g0320 533 Pfam Cytochrome P450 55 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 Coils Coil 301 321 - -
Apr3g0320 533 Gene3D Cytochrome P450 47 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PANTHER CYTOCHROME P450 84A1-RELATED 23 533 - -
Apr3g0320 533 SUPERFAMILY Cytochrome P450 55 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0320 533 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 23 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0320 Apr-Chr3 6375919 6380455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0320 29 533 Monolignol Biosynthesis Gene Families AT4G36220 72.925 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0320 K09755 - gmx:100807448 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0320 3 6375919 6380455 Apr7g1074 7 17707789 17711098 ECH
Apr3g0320 3 6375919 6380455 Apr3g0320 3 6375919 6380455 ECH
Apr3g0320 3 6375919 6380455 Apr7g1074 7 17707789 17711098 PCT