Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0317 ATGGATATTGGTGGGGAAGTTAGAGAGACCGGGAGAGAGTTGAGGAAATACTTCAACACTGGAAGAACAAGAAGTGTAACGTGGAGGAAAACCCAGCTCACAGCTCTCTTAGACCTTATTCATGACAATGAAGATGCTATTTTTAAGGCTCTTCACCATGATCTTGGGAAGCACCCTGCTGAGGCTTACCGCGATGAGATTGGAGGGGTAGAAAAATCAGCCACCAACACTTTGAGCTGCGTTGAAAAATGGATGGCCCCTAAAAAGAGTCATATTCCCCTGCTTTTCTTCCCAGCAAAAGGAGAAGTGATGTCAGAGCCGCTTGGTGTGGTTCTCATATTTTCTTCTTGGAATTTCCCAATCATGTTAGCATTGGATCCATTAATTGGGGCAATATCTGCTGGAAATGCTGTAGTCATAAAACCTTCAGAGCAAGCTCCAGCGTGCTCTTCTTTTCTTGCTAATACCATTCCTCAATACTTGGACTTTCATGCCATCAAGGTGATTGAGGGCGGAGCAGATGTTTGCGAACAACTACTGCAAGCGAAATGGGACAAAATATTCTTCACTGGAAGTCCACGTGTGGCAAGCTTAGTCATGTCTGCTGCTGCTAAGAATTTAACTCCTGTTACTCTAGAACTTGGTGGAAAATGCCCTGCCATACTTGATTCCCTTCCCAATCCTTCAGACTTTAAGTTCGCAGCCAAAAGAATTGTAGGAGGAAAGTGGGGACCTTGCAGTGGACAGGCTTGTATAGGAATAGACTATTTGCTTGTTGAGGAAAAGTTCTCATCGGCTCTGATAGAACTATTAAAGAAGATAATCAGAAGATTTTATGGTGAAAACCCAATAGAGTCAAAGGTAATTTCAAGAATAATAAACAAGCAACACTTTGAGAGATTATGCAATCTTCTCAAAGATCCTCTTGTCGTGGCTTCCATTGTTCATGGTGGTTCAATCGATGAAGAAAACCTCTTCATTGAGCCTACAATCTTGTTAGATCCTCCACTAGACTCTAAGATAATGACGGAAGAAATCTTTGGCCCACTGCTTCCAATAATCACAATAAATAAAATTAAGGATAGTGTTGAATTTATCAATTCAAGGCCAAAACCTCTTGCCATTTATGCCTTCACCAAAGATGAAACTTTCAAGAGCAAGATTCTATCAGAAACATCCTCAGGAAGTGTCATATTTAACGACACATTGGTTCAATTTCTATGTGATACACTACCATTTGGAGGGGTTGGCCAGAGTGGTTTTGGAAGGTACCATGGAAAGTACTCTTTTGACACTTTCAGTCATGAAAAAGCTGTATTGCATAGAAACCTATGCCTTGAAATTGAGCCAAGGTACCCTCCTTGGAGTAAGTTCAAGCAAGACTTCCTCAGATTGGCATACAGGCTGAACTACTTTGCACTAATACTTCACATTCTGGCCTTCAAACTGGGCTTGAAAAGAGACAACTAG 1470 0.415 MDIGGEVRETGRELRKYFNTGRTRSVTWRKTQLTALLDLIHDNEDAIFKALHHDLGKHPAEAYRDEIGGVEKSATNTLSCVEKWMAPKKSHIPLLFFPAKGEVMSEPLGVVLIFSSWNFPIMLALDPLIGAISAGNAVVIKPSEQAPACSSFLANTIPQYLDFHAIKVIEGGADVCEQLLQAKWDKIFFTGSPRVASLVMSAAAKNLTPVTLELGGKCPAILDSLPNPSDFKFAAKRIVGGKWGPCSGQACIGIDYLLVEEKFSSALIELLKKIIRRFYGENPIESKVISRIINKQHFERLCNLLKDPLVVASIVHGGSIDEENLFIEPTILLDPPLDSKIMTEEIFGPLLPIITINKIKDSVEFINSRPKPLAIYAFTKDETFKSKILSETSSGSVIFNDTLVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVLHRNLCLEIEPRYPPWSKFKQDFLRLAYRLNYFALILHILAFKLGLKRDN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0317 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Apr3g0317 489 PANTHER ALDEHYDE DEHYDROGENASE 12 482 IPR012394 GO:0006081
Apr3g0317 489 SUPERFAMILY ALDH-like 6 454 IPR016161 GO:0016491
Apr3g0317 489 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 12 482 - -
Apr3g0317 489 PIRSF ALDH 5 479 IPR012394 GO:0006081
Apr3g0317 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Apr3g0317 489 Pfam Aldehyde dehydrogenase family 16 439 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0317 Apr-Chr3 6289750 6293606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0317 7 487 Aldehyde Dehydrogenase Gene Family AT4G36250 61.746 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0317 K00128 - gmx:100809812 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0317 3 6289750 6293606 Apr3g0317 3 6289750 6293606 ECH