Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0316 ATGGGGTGGATTATTGGACTATGGACTCTGATGGGTATCCTTTTATGTCGGTGGTTTCTTTGTGTGAAGAAGGAGAATAGTGATACACTGAAGAAGAAGAAAAAGGGAAAAGTTCCAAAAGGGAACACAGGGTGGCCTTTACTTGGGGAGACCCTTGATTTCATTGCTTGTGGCTACACCTCCAATCCCGTTAGCTTCATGGAAAAGCGCAAGTCTCTGTATGGGCATGTGTTTAAGACGAGTATTTTGGGAACTGGTGTGATAGTGTCCACGGACCCGGAGGTGAACAAAGTGATTCTGCAGAATCAGGGGAATATCTTCGTCCCTGCTTATCCAAAATCAGTTAGAGAACTAATGGGAGAACACTCAATACTCCAAATGAACGGGAACATGCATAGGAAAATCCATTCACTCCTTGGTGGGTTCCTCCGATCCCCACAATTCAAAGCTCGAATCACCAGAGATATTGAACATTCTGTTAAACAATGCTTTGCAACTTGGACCCACCAACCAGTATACGTTCAAGATCAAGTCAAAAAGATTACATTTACTATTTTGGTTAAAGTTCTGATGAGCATTGGCCCCGGTGAAGACTTAGACTTCTTGAAGAGAGAATTTGAAGAGTTCATAAAGGGGTTGATTTGCTTACCCCTCAAGTTTCCAGGAACAAGACTTTATAAATCCTTGAAGGCCAAGGAAAGAATGAAGAAGATAGTGCAGAGGGTAATAGAGGAAAGGAACAATAATATCCACAATAATAAGGGCGGTGCAGCCAATGATGTGGTGGATGTGCTCTTACGGGATCAGAGTGACCCCAAGTCTATCCCTAACATGTTGGAAAATATCTGCGAGAACATCATTGAGATGATGATTCCTGGGGAGGAGACTCTTCCCACCGCTATGACCATGGCTGTCAAGTTTCTCAGTGACTCTCCTGTTTCTCTATCCAAATTATTGGAGGAGAACATGGAATTGAAGAGGCAGAAGAATAGTTCAGATGATTATGCTTGGAGTGACTACTTATCACTGCCATTCACTCAAAATGTTATCAGCGAAACTCTTAGAATGGCAAATATTGTCAATGCCATTTGGAGAAAAGCAGTGAAAGACGTAGATATTAAAGGGTACCTAATTCCTAAGGACTGGTGTGTTGTGGCTTCTCTTACCTCTGTTCATTTGGATGGCATGAATTATGAAAACCCGTTGGAGTTTGATCCGTGGAGATGGGAGAAAATTGGAGCTGGGGCTAATAACAATTGCTTTACACCATTCGGTGGTGGACAAAGATTGTGCCCTGGGATAGAACTCTCAAGGCTAGAGCTCTCTATTTTCCTTCACCATCTTGTTACTACTTACAGATGGGTTGCTGAAAGGGATGAAATTATCTACTTTCCAACAGTTAAGATGAAGAGGAAGCTCCCAATTAGTGTAACAACCATTAACACCTGA 1449 0.4231 MGWIIGLWTLMGILLCRWFLCVKKENSDTLKKKKKGKVPKGNTGWPLLGETLDFIACGYTSNPVSFMEKRKSLYGHVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKSVRELMGEHSILQMNGNMHRKIHSLLGGFLRSPQFKARITRDIEHSVKQCFATWTHQPVYVQDQVKKITFTILVKVLMSIGPGEDLDFLKREFEEFIKGLICLPLKFPGTRLYKSLKAKERMKKIVQRVIEERNNNIHNNKGGAANDVVDVLLRDQSDPKSIPNMLENICENIIEMMIPGEETLPTAMTMAVKFLSDSPVSLSKLLEENMELKRQKNSSDDYAWSDYLSLPFTQNVISETLRMANIVNAIWRKAVKDVDIKGYLIPKDWCVVASLTSVHLDGMNYENPLEFDPWRWEKIGAGANNNCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKMKRKLPISVTTINT* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0316 482 Pfam Cytochrome P450 39 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 PRINTS E-class P450 group IV signature 65 88 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 PRINTS E-class P450 group IV signature 343 359 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 PRINTS E-class P450 group IV signature 392 410 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 PRINTS E-class P450 group IV signature 415 431 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 6 477 - -
Apr3g0316 482 Gene3D Cytochrome P450 27 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 SUPERFAMILY Cytochrome P450 34 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Apr3g0316 482 PANTHER CYTOCHROME P450 26 6 477 - -
Apr3g0316 482 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0316 482 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0316 Apr-Chr3 6239719 6246664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0316 23 453 Cytochrome P450 AT3G13730 51.945 7.75e-163 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0316 K12637 - gmx:100812489 867.84