Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0310 ATGTCAACGGAAGCTTCCAAGCGCGACCAATGGCAGTGGGAGAACGCCACCGCCGGCGCTGCCGCCGGATTCGCCACCGTCGCCGTCATGCATCCCCTCGACGTTGTCCGAACTAGGTTCCAAGTTAACGATGGCCGGGTCTCTCATCTTCCCAGTTACAAGAACACTGCTCACGCCGTTTTCACCATTGCTCGCTCTGAGGGATTAAGAGGCTTATATGCGGGCTTTCTTCCTGGGGTTCTTGGGTCAACTATTTCATGGGGTTTATATTTCTTTTTCTATGACAAAGCCAAGCAAAGATATGCTAGGAACAGGGAGGGTAAGTTGAATGCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGCTTTGGTTTGCCTGTGCACAAATCCTGTGTGGCTAGTAAAGACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGACCATACTCTGGGCTTTATGATGCATTTAGGACCATAATGAGGGAGGAAGGATTTAGTGCACTTTACAAAGGGATCGTTCCTGGTCTGTTTCTGCAGGTCTCTCATGGTGCTATTCAGTTCACAGCATATGAGGAGCTTCGTAAAGTTATTGTCGATTTTAAGAGTAAGGGAAGTACAACACATCATCAAAACCCTGATAAACTGCTGAATTCTGTTGATTATGCCGTTCTTGGAGCAACATCAAAACTTGCTGCAATACTTCTGACCTATCCATTTCAGGTTATACGGGCCCGATTGCAGCAACGACCTAGTGGTGATGGAGTTCCAAGATATATGGACAGTTGGCATGTTGTGAAAGACACTGCCCGATTTGAAGGTGTCCGGGGTTTTTATAAAGGAATTACTGCAAACCTTTTAAAAAATGCTCCTGCTTCATCAATAACATTTATTGTTTATGAAAATGTACTAAAATTGCTTAAACTGACTAGAAGGAATGACTGA 948 0.4546 MSTEASKRDQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTIARSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARNREGKLNAGLHLASAAEAGALVCLCTNPVWLVKTRLQLQTPLHQTRPYSGLYDAFRTIMREEGFSALYKGIVPGLFLQVSHGAIQFTAYEELRKVIVDFKSKGSTTHHQNPDKLLNSVDYAVLGATSKLAAILLTYPFQVIRARLQQRPSGDGVPRYMDSWHVVKDTARFEGVRGFYKGITANLLKNAPASSITFIVYENVLKLLKLTRRND* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0310 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 309 IPR044712 GO:0006862|GO:0055085
Apr3g0310 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 198 IPR018108 -
Apr3g0310 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Apr3g0310 315 Gene3D Mitochondrial carrier domain 108 312 IPR023395 -
Apr3g0310 315 Gene3D Mitochondrial carrier domain 1 107 IPR023395 -
Apr3g0310 315 SUPERFAMILY Mitochondrial carrier 12 303 IPR023395 -
Apr3g0310 315 Pfam Mitochondrial carrier protein 221 309 IPR018108 -
Apr3g0310 315 Pfam Mitochondrial carrier protein 110 200 IPR018108 -
Apr3g0310 315 Pfam Mitochondrial carrier protein 11 104 IPR018108 -
Apr3g0310 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 307 IPR018108 -
Apr3g0310 315 PANTHER BNAA09G07970D PROTEIN 10 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0310 Apr-Chr3 5978181 6002159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0310 32 308 Chloroplast and Mitochondria Gene Families AT2G47490 37.676 9.81e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0310 K15115 - gmx:100809599 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0310 3 5978181 6002159 Apr3g0310 3 5978181 6002159 ECH