Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0301 ATGCTGAATCTTTCAAAAGACAAGATAATACTATTCGTAGTGCACAACTATTATGACATAATCGTGGTCGCTTTACTCTCTATAGGAGTAACATATTTCGCTTCAAAAGCTTGGAAAAGAGCAACAAATAAGAGAGAAGATATCCCTGGCCGGCTGGGATTGCCTTTTATTGGGGAAACTTTTTCTTTTCTTTCAGCCACTAATAGTACAAGGGGATGCTATGATTTTGTCAGACTTAGGCGATTGTGGAATGGGAGATGGTTCAAGACAAGGCTTTTCGGCAAGATTCACATATTTATTCCCAGTCCTGAAGGCGCAAGGACGATATTTGCAAATGACTTTGTTCAATTCAACAAGGGTTACGTAAAATCAATGGCAGATGCCGTGGGAGAGAAAAGCTTGCTATGTGTACCCGTTGAAAGCCACAGAAGAATAAGGCGTCTTCTATCTGAACCATTCTCCATGACTTCCCTATCTGCATTTGCAACAAAATTTGACAAAATATTGTGCGGAAGGCTGCAAAAGCTAGAAGAAAGTGGGAAAAGTTTCAAGGTGCTGGACTTCTGTATGAAGATGACATTTGATGCAATGTGTGATATGCTGATAAGCGTCAGGGAGGATTCACTACTACAACAGATCGAGAAAGACTGCACCGCCGTCTCTGATGCCATGTTATCCTTTCCTATCATGATTCCTGGCACCAGATACTATAAAGGCATAACGGCTCGTAAAAGGCTCATGGAGACCTTCACAGAAATCATTGCACGACGGAGGAGGGGAGATGAGTCTCCAGGAGACTTCCTGCAATCAATGTTGCAGAGAGACTCGTTCCCAGCCAGTGAAAAGCTTGATGACTCGGAGATTATGGATAATCTGCTAACATTGATAATTGCTGGACAGACCACCACAGCAGCAGCTATGATGTGGAGTGTTAAGTTTCTAAATGACAACAGAGAAGCACAGGACACACTCAGGGAAGAACAATTATCTATAACCAAAATGAAGCCAGATGGAGCTGCAATTGATCATGAGGATCTCAGCAACATGCGTTATGGTTTGAAGGTAGTTAAGGAAACATTGAGAATGTCCAATGTCCTGTTATGGTTTCCTCGTGTTGCCCTTCAAGACTGCACGATTGAAGAAGGGCTTTTATCATCAGTCTTTCTGGCCTTCATGATTATGTTACCAATTATAAGGATGGCCATAACAGGGTATGATATAAAGAAAGGTTGGCATGTAAACATTGATGCAACTTATATACATCACGATTCAGATTTGTACAACAATCCATTGAAATTCAACCCACAGAGATTTGATGAAATGCAAAAGCCGTACAGTTTCATACCTTTTGGATCGGGGCCTAGAACATGCCTTGGAATCAATATGGCAAAAGTGACAATGTTGGTCTTTTTACACAGACTCACTGGTGGTTACAAGTGGACCCTTGATGATTTAGATACTTGCTTAGAAAGGAAGGCACACATACCTAGACTAAAGAGTGGCTGCCCAATAACTTTGAAGTCCTTGAGCAAAAGCATGCCACAGGCATAA 1551 0.4165 MLNLSKDKIILFVVHNYYDIIVVALLSIGVTYFASKAWKRATNKREDIPGRLGLPFIGETFSFLSATNSTRGCYDFVRLRRLWNGRWFKTRLFGKIHIFIPSPEGARTIFANDFVQFNKGYVKSMADAVGEKSLLCVPVESHRRIRRLLSEPFSMTSLSAFATKFDKILCGRLQKLEESGKSFKVLDFCMKMTFDAMCDMLISVREDSLLQQIEKDCTAVSDAMLSFPIMIPGTRYYKGITARKRLMETFTEIIARRRRGDESPGDFLQSMLQRDSFPASEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLNDNREAQDTLREEQLSITKMKPDGAAIDHEDLSNMRYGLKVVKETLRMSNVLLWFPRVALQDCTIEEGLLSSVFLAFMIMLPIIRMAITGYDIKKGWHVNIDATYIHHDSDLYNNPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGINMAKVTMLVFLHRLTGGYKWTLDDLDTCLERKAHIPRLKSGCPITLKSLSKSMPQA* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0301 516 PANTHER CYTOCHROME P450 FAMILY PROTEIN 21 381 - -
Apr3g0301 516 PANTHER CYTOCHROME P450 FAMILY PROTEIN 400 509 - -
Apr3g0301 516 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 Gene3D Cytochrome P450 37 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 PANTHER CYTOCHROME P450 26 400 509 - -
Apr3g0301 516 PANTHER CYTOCHROME P450 26 21 381 - -
Apr3g0301 516 Pfam Cytochrome P450 53 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 Pfam Cytochrome P450 400 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 SUPERFAMILY Cytochrome P450 39 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0301 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0301 Apr-Chr3 5831851 5835201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0301 49 481 Cytochrome P450 AT1G19630 43.478 1.05e-120 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0301 - - gsj:114390394 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0301 3 5831851 5835201 Apr3g0301 3 5831851 5835201 ECH