Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0273 ATGTCAGACTCACACCTCACTTTCTGTTTTCTTTCTTGCATCCTTGCTCTCATTGTAATCTTCATTTTCATCAGAAGAAGAAAACCAAGGTTCAATCTTCCCCCTGGCGAAATGGGATGGCCCCTTCTTGGGGAAACCATTGGGTATTTGAAGCCTTACCCTGCTATCACAATAGGAGAATTTATGGAGAAGCATATAGCAAGGTATGGTACAATTTATAAGTCAAAGTTGTTTGGTGAGCCAGCCATAGTCTCAGCAGATGCAGGGTTGAATAGATTCATATTGCAAAACGAAGGGAAGTTGTTTGAATGCAGCTATCCTAGGAGCATTGGGGGAATACTTGGAAAATGGTCTATGTTGGTGTTGGTTGGGGACATGCATAGGGACATGAGGAATATATCACTCAACTTTCTCAGCAATGCAAGGATCCGAACGCAGCTATTGAAAGAGGTGGAGAAACATAGCCTTCTAGTTATAAGCTCGTGGAAGGAAAATTGCTCATTCTCAGCTCAAGAAGAAGCAAAGAAGTTCACCTTCAATTTTATGGCGAAACATATCATGAGCTTGGATCCTGGGAATCTCGAGACAGAACAATTGAAGAGAGAATATGTCTCTTTCATGAAAGGTGTGGTATCTGCGCCTTTGAATTTCCCCGGAACTGCATACAGGAAAGCACTAAAGTCTAGGTCCACCATACTGAAGTTCATAGAGGGGAAAATGGAAGAAAGGGCCAAGAGAAACCAAGAGGGAAAGAAAAGTTTGGAGGAAGATGATCTTCTAAACTGGGTTTTGATGCATTCAAATCTTTCAACTGAGCAAATTCTTGACTTGATTCTGAGCTTGCTCTTTGCTGGCCATGAAACTTCATCGGTAGCCATAGCTCTAGCTATTTACTTCTTGCCGGGTTGTCCTCGAGCTATACAACAATTAAGGGAAGAACACGTAGAAATAGTCAGATCGAAGAAGCAAACAGGGGAAGTTGAATTGACGTGGGATGATTACAGAAGTATGGAGTTTACTCACTGTGTTGTGAACGAAACACTTAGGCTGGGAAATGTTGTGAGGTTTCTTCACAGGAAAGCTCTGAAAGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTTCTTCCGGTGATTGCAGCGGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACAATTCAATCCATGGAGATGGCAGGGCAATAATAAAAGTGGAAATTGTAAAAACACGAACAATAACTTCATGCCGTTCGGAGGAGGAACAAGGTTGTGTGCGGGATCAGATTTAGCTAAACTTGAAATGGCTGTGTTCCTACACCACCTCGTTCTCAACTACCACTGGGAACTGGTCGATGCAGATCAACCTGTTGCATACCCTTTTGTTGATTTCCCCAAAGGCCTATCCGTCAGAGTCCAAAGCTACAAAACAGAAGGTTTGAAGTATATCTCTGATGTTTTATATGTGCCTAACATTGACCAAAATTTGCTTAGTGTTGCACAACTTGTGAAAAAGGGCTTCAAAGTCATATTTGAAGATAACTGGTGTTTGATCAAAGATGCAAAAGGCAAAGATGTATTCAGAGTGAAAATGAGATCTAATAGCTATGCTCTAAATATGATGGAGGAGGAGCAAATAGCTTTTTCAAGCACAACCACCAATGCTGATCTACGGCATAAAAGACTTGGACATTTTCATCTTGCAAGACTGTTATACATGCAGAAACATGCCTTGGTGAAAGGTGTCTTGATGCTTGAAGACGATGCTTGA 1782 0.4169 MSDSHLTFCFLSCILALIVIFIFIRRRKPRFNLPPGEMGWPLLGETIGYLKPYPAITIGEFMEKHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRNISLNFLSNARIRTQLLKEVEKHSLLVISSWKENCSFSAQEEAKKFTFNFMAKHIMSLDPGNLETEQLKREYVSFMKGVVSAPLNFPGTAYRKALKSRSTILKFIEGKMEERAKRNQEGKKSLEEDDLLNWVLMHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPRAIQQLREEHVEIVRSKKQTGEVELTWDDYRSMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQQFNPWRWQGNNKSGNCKNTNNNFMPFGGGTRLCAGSDLAKLEMAVFLHHLVLNYHWELVDADQPVAYPFVDFPKGLSVRVQSYKTEGLKYISDVLYVPNIDQNLLSVAQLVKKGFKVIFEDNWCLIKDAKGKDVFRVKMRSNSYALNMMEEEQIAFSSTTTNADLRHKRLGHFHLARLLYMQKHALVKGVLMLEDDA* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0273 593 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 Pfam Cytochrome P450 34 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 SUPERFAMILY Cytochrome P450 30 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Apr3g0273 593 Gene3D Cytochrome P450 24 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr3g0273 593 PANTHER CYTOCHROME P450 90B1 16 456 - -
Apr3g0273 593 PANTHER CYTOCHROME P450 26 16 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0273 Apr-Chr3 5374811 5385686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0273 25 408 Cytochrome P450 AT3G50660 73.333 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0273 K09587 - gmx:100802498 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0273 3 5374811 5385686 Apr3g0273 3 5374811 5385686 ECH
Apr7g1016 7 17197750 17202672 Apr3g0273 3 5374811 5385686 PCT