Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0269 ATGTCTTCCCCTCACAATTCTACTCCTGATAACTCCACACCCGATAATGCCACGCCTGACAACTCCACTCCCGATAACTCCACCCCCGATAACTCCACCCCCGATAACTCCACTCCCGATAACTCCACCCCTGATAATTCTACTCCCGATAACGCCACCCCCGATAATTCCACGCCAGATAATTCCTCGCATGATAACTCTAATGCGCCACCCCAGAATTCCCAACCATCTCCTCATTCATCAACGAAATCTCCATCACCACCAAACTCCAATGCCCCACACAAAAGTTCCTCATCATCCCCTTCTTCATTTGCGGATCAGTCTCCATCATTGCCAGAATCGTCACACAAATCATCAAAAGAAAGCTCAAAGTCCAAAAATGACGATAGCAACAAAGCAGCATTAGGAGCCGGGCTTGGTGTAGGATTTGTTGTTCTTGTTCTAGTTATTATTTGTTTTATTTGGTGCAGGAAGAAGAAACGAAAGCAAAAACAATACTTTGGAGGAGAACCTTCTCCTGGAAAAGGAAGTAACTATTACAACAGTGGGCAACACCCTCAATCCAATTGGCAATCAGGTTCAGGCCCTCATGGAGGGGACCATGTTGTTAGGGTACACCCAGCTGGTATGGGAATGGGTCCTCCTAGTAGTGTTTGGGGAGCACAACATCCTCTAATGAACAGCGGTGACATGAGCTCCAATTACTCATCGGGAATGGGAATGGGAATGGGAATGGGTCCTCCTTCACCGGGCCTTTCCCTCACTCTCAAGGGTGGTACTTTCACATATGAGGAATTGGCAGCTGCCACCAAAGGATTTGCTAATGAGCATATTGTTGGACAGGGTGGATTCGGTTATGTCCATAAGGGAGTTTTGCCTAATGGAAAGGAAGTGGCTGTTAAGAGTCTAAAATCAGGTAGTGGCCAAGGAGAGCGTGAATTCCAAGCTGAGATTGATATCATTAGTCGTGTTCATCATCGTCATCTTGTATCACTTGTTGGATATTGTATTAGTGGTGGCCAAAGAATGTTGGTCTATGAATTTGTTCCCAATAAAACTTTAGAACATCACCTTTATGGAAAGGGTTTGCCTACCATGGATTGGCCTACTAGAATGCGAATTGCACTAGGATCTGCTAGAGGACTTGCCTACCTTCACGAAGATTGTAATCCTCGCATCATTCATCGTGATATTAAAGCTTCTAATGTCCTCCTTGATGATAGCTTTGAAGCAAAGGTGTCAGATTTTGGACTGGCTAAGTTAACTACTGATAATAATACGCATGTCTCAACTCGTGTCATGGGAACATTCGGGTACTTGGCCCCAGAATATGCATCAAGTGGAAAATTGACAGAGAAATCCGATGTTTTCTCATTTGGGGTTATGTTATTAGAACTCATAACTGGGAAGCGACCTTTGGATTTGACAAATGCCATGGATGAAAGCTTAGTGGACTGGGCTCGACCACTCTTAAGTAAAGGGTTGGAGGAAGATGGCAACTTTGGAGAGTTAGTGGATCCATTTTTGGAAGGCAATTACAATGCTCAAGAAATGACAAGAATGGCAGCTTGTGCTGCTGCAAGCATTCGTCATTCTGCTAAGAAGCGTCCAAAAATGAGTCAGATTGTAAGAGCATTGGAAGGAGATGTCTCATTAGAAGACTTGAAAGATGGAATGAAGCTTGCAACGACGAATAACAATGCTTACACCTCTTCATCTGGGAGCTCAGAATATGATACAATGCAATATAATGCTGACATGTTGAAGTTCAGAAAGGCAATAATGTCGAGCCAAGAATTTGGCGACAGCAGTGAGCTTTCTAGTAAGGAGATGGGTTATCATTAG 1845 0.4407 MSSPHNSTPDNSTPDNATPDNSTPDNSTPDNSTPDNSTPDNSTPDNSTPDNATPDNSTPDNSSHDNSNAPPQNSQPSPHSSTKSPSPPNSNAPHKSSSSSPSSFADQSPSLPESSHKSSKESSKSKNDDSNKAALGAGLGVGFVVLVLVIICFIWCRKKKRKQKQYFGGEPSPGKGSNYYNSGQHPQSNWQSGSGPHGGDHVVRVHPAGMGMGPPSSVWGAQHPLMNSGDMSSNYSSGMGMGMGMGPPSPGLSLTLKGGTFTYEELAAATKGFANEHIVGQGGFGYVHKGVLPNGKEVAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYCISGGQRMLVYEFVPNKTLEHHLYGKGLPTMDWPTRMRIALGSARGLAYLHEDCNPRIIHRDIKASNVLLDDSFEAKVSDFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPLDLTNAMDESLVDWARPLLSKGLEEDGNFGELVDPFLEGNYNAQEMTRMAACAAASIRHSAKKRPKMSQIVRALEGDVSLEDLKDGMKLATTNNNAYTSSSGSSEYDTMQYNADMLKFRKAIMSSQEFGDSSELSSKEMGYH* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0269 614 MobiDBLite consensus disorder prediction 175 195 - -
Apr3g0269 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 393 405 IPR008271 GO:0004672|GO:0006468
Apr3g0269 614 SUPERFAMILY Protein kinase-like (PK-like) 253 546 IPR011009 -
Apr3g0269 614 MobiDBLite consensus disorder prediction 1 130 - -
Apr3g0269 614 SMART serkin_6 273 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0269 614 MobiDBLite consensus disorder prediction 1 116 - -
Apr3g0269 614 MobiDBLite consensus disorder prediction 163 201 - -
Apr3g0269 614 ProSiteProfiles Protein kinase domain profile. 273 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0269 614 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Apr3g0269 614 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 613 - -
Apr3g0269 614 Gene3D Transferase(Phosphotransferase) domain 1 349 567 - -
Apr3g0269 614 PANTHER RECEPTOR-LIKE KINASE 14 613 - -
Apr3g0269 614 Pfam Protein tyrosine and serine/threonine kinase 276 543 IPR001245 GO:0004672|GO:0006468
Apr3g0269 614 Gene3D Phosphorylase Kinase; domain 1 253 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0269 Apr-Chr3 5264012 5267825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0269 137 605 Trihelix Transcription Factor Family AT1G70460 51.471 1.35e-150 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Apr3g0269 PK_Tyr_Ser-Thr 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0269 - - gmx:100805872 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0269 3 5264012 5267825 Apr7g1013 7 17150995 17156107 ECH
Apr3g0269 3 5264012 5267825 Apr3g0269 3 5264012 5267825 ECH
Apr7g1013 7 17150995 17156107 Apr3g0269 3 5264012 5267825 PCT