Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0261 ATGAGAGTTCCCTCCTCATCCCCACAGACCAATAATCATTCCTCCAACTCAAAACTCACTCAAAATCCAAATCCAAATCATAACCCAAACCCAAACCTTGTCCTTCACACCCCACCCAGCAATAACCAAACTTTCAGCTACGAACCCACCTCTGTTCTCGACCTCTGCCGCAGTCCCAGCCCCGAAAAGAAACCCACAGTCCCAAAGGCAGAAGCAGATCCCAATCTAGAGCTGGACGATCATGTGTTGCCTAATTTGGATTGGTGGGATTCAATCATGAAGGACTTGGCCTTACCCGAAGACTCAGCCAATCCCCTATTGAAGCCTACCAACATTAATTCTGATAACCTAAATTCCAATTCATGCATCCCTGATTTCCCACCCTTTGATCACCCTCAAGACTTCTTGGAAATTTACTCCAATCAAAACCTGCCCTTTAATTACAATACTAGTAACGCTTTGGACCATTCGGTTCACGATTTCAGTCACCACCATCACCACAACAACACCAACACCAACACCAATTGGGATTTCATCGAAGAGCTTATCCGTGCAGCTGATTGCTTCGACAACAACCACCTCCAACTAGCTCAAGCCATATTGGAGCGTCTCAACCAACGGCTTCGTGCCCCGATTGGAAAACCACTCCACCGAGCCGCGTTTCACTTCAAAGACGCTCTGCAGTCTCTTCTCTCCGGTTCCAACCGAACCGGATCCAACCGGCTTTCTTCAATGGCGGAGATCGTGCAAACGATTAAAACGTTCAAGGCCTTTTCGGGAATTTCACCGATCCCAATGTTCTCTATCTTCACCACCAATCAAGCGCTTCTCGAAACCCTACACGGCTCTTCCTTCATCCACATCATCGATTTCGAAATCGGCCTCGGAATCCAATACGCTTCTCTCATGAAAGAGATGGCCGAGAAGGTCGCCGGAAACTTGCCGCTCCTCCGCATCACCGCTGTTGTTCCGGAAGAGTACGCCGTCGAGAGCCGCCTCATCCGCGAGAACCTCAACCAGTTCGCTCACGACCTCGGAATCCGCGTCCAGGTTGACTTCGTGCCGCTTCGTACCTTTGAGGCGGTGTCGTTCAAGGCCGTCAGGTTCGCCGACGGCGAGAAGATAGCCGTGCTGTTGTCGCCGGCCATTTTCTGCCGTCTCGGCTCCGGAGGAAGCAGCGTCGCCGCGTTTCTCGCAGACGTGAGGAGGATGTCTCCCGGCGTGGTAGTGTTCGTCGATGGCGAGGGGTGGACAGAGGCGGCGGCTGCGGCGTCGTTTCGGCGGGGCGTGGTGAACAGCTTGGAGTTCTATTCGATGATGTTGGAGTCGCTGGATGCGTCGGTTGTGGCAGGAGGAGGGGGCGATTGGGTGAGGAGGATCGAGATGCTTCTGCTGCGGCCAAAGATGTTGGTGGCGGTGGAGAGCGCTGGAAGAAGAACGCCGCCGTGGAGGGAGGCGTTTTACGGCGCCGGAATGAGGCCGGTGCAGTTGAGCCAGTTCGCCGATTTTCAGGCCGAGTGTTTGCTGGCGAAAGTGCAAATACGAGGCTTCCACGTGGAAAAACGACAAGCTGAGTTGGTGCTCTTCTGGCACGGAAGGGCCATGGTTGCCACGTCAGCTTGGCGGTGTTAG 1632 0.5368 MRVPSSSPQTNNHSSNSKLTQNPNPNHNPNPNLVLHTPPSNNQTFSYEPTSVLDLCRSPSPEKKPTVPKAEADPNLELDDHVLPNLDWWDSIMKDLALPEDSANPLLKPTNINSDNLNSNSCIPDFPPFDHPQDFLEIYSNQNLPFNYNTSNALDHSVHDFSHHHHHNNTNTNTNWDFIEELIRAADCFDNNHLQLAQAILERLNQRLRAPIGKPLHRAAFHFKDALQSLLSGSNRTGSNRLSSMAEIVQTIKTFKAFSGISPIPMFSIFTTNQALLETLHGSSFIHIIDFEIGLGIQYASLMKEMAEKVAGNLPLLRITAVVPEEYAVESRLIRENLNQFAHDLGIRVQVDFVPLRTFEAVSFKAVRFADGEKIAVLLSPAIFCRLGSGGSSVAAFLADVRRMSPGVVVFVDGEGWTEAAAAASFRRGVVNSLEFYSMMLESLDASVVAGGGGDWVRRIEMLLLRPKMLVAVESAGRRTPPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVEKRQAELVLFWHGRAMVATSAWRC* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0261 543 Pfam GRAS domain family 179 542 IPR005202 -
Apr3g0261 543 MobiDBLite consensus disorder prediction 1 78 - -
Apr3g0261 543 MobiDBLite consensus disorder prediction 1 53 - -
Apr3g0261 543 PANTHER SCARECROW-LIKE PROTEIN 15 6 542 - -
Apr3g0261 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 542 IPR005202 -
Apr3g0261 543 ProSiteProfiles GRAS family profile. 169 542 IPR005202 -
Apr3g0261 543 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0261 Apr-Chr3 5083544 5086321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0261 75 542 GRAS Transcription Factor Family AT4G36710 53.170 3.33e-163 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr3g0261 GRAS 6.5e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0261 - - gmx:100785004 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0261 3 5083544 5086321 Apr3g0261 3 5083544 5086321 ECH
Apr7g0999 7 17035305 17037337 Apr3g0261 3 5083544 5086321 PCT