Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0260 ATGGGAACTAGGGAAGAGAGCACAGCTAAACCTTCTAAATCATCTTCGTCAACTCAGGAGATACCACCAGGACCTGCATATCCTGATTGGTCAAGCTCCATGCAGGCCTACTATGCTCCTGGAGCCACTCCACCTCCCTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCTCATCCCTATTTATGGGGAAGCCAGCATCCTTTGATGCCGCCATATGGGACTCCAGTCCCATATCCTGCTTTATATCCTCCTGGGAGTATCTATGCTCATCCTAGCATGGCAGTGAAGACTCCAAGTGCTGTCCAGCAAAGTACAGAGATTGAAGGGAAAGGACCTGAAGGAAAAGATCGAAACTCATCCAAAAAATTGAAGGGAACTTCTGCAAATACAGGTTCCAAAGCAGGAGAGAGTAGAAAGGCAGGCTCAGGTTCTGGCAATGATGGCATCTCACAAAGTGCTGAAAGCGGTTCAGAGGATTCATCAAATGCTAGCGATGAGAATACTAACCAACAGGAATCAAACAAGAAGGGGAGCTTTGACCAGATGCTTGTTGATGGAGCCAATGCACAGAACAATTCTACTGGTGCGATTTCTCAATCTTCTGTGCCTGGAAAACCTGTTGTCTCAATGCCTGCAACTAATCTTAATATTGGAATGGACTTATGGAATGCATCTTCTGGTGGTGCTGAAGGTGCAAAATTGAGACATAATCAATCTGGTGCCCCAGGAGCTGTTGCTTCAACCGTAATGGGACGTGAAGTTGCACTTGGTGAACAATGGATACAAGATGAACGTGAGTTGAAACGACAGAAAAGGAAACAGTCTAACAGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGAGTGGAGACGCTGGGAAGTGAGAACCAAACTCTAAAAGAAGAGCTTCAGAGACTATCTGAAGAATGTGAGAAGCTTACATCTGAAAATAATTCTATCAAGGAAGAGTTGGAACGGTTGGGTGGGCCAGAAGCAGTTGCTAACCTTGGATGA 1041 0.4582 MGTREESTAKPSKSSSSTQEIPPGPAYPDWSSSMQAYYAPGATPPPFFASTVASPTPHPYLWGSQHPLMPPYGTPVPYPALYPPGSIYAHPSMAVKTPSAVQQSTEIEGKGPEGKDRNSSKKLKGTSANTGSKAGESRKAGSGSGNDGISQSAESGSEDSSNASDENTNQQESNKKGSFDQMLVDGANAQNNSTGAISQSSVPGKPVVSMPATNLNIGMDLWNASSGGAEGAKLRHNQSGAPGAVASTVMGREVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVETLGSENQTLKEELQRLSEECEKLTSENNSIKEELERLGGPEAVANLG* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0260 346 CDD bZIP_plant_GBF1 269 319 IPR045314 GO:0003700|GO:0006355
Apr3g0260 346 PANTHER G-BOX-BINDING FACTOR 1 1 345 - -
Apr3g0260 346 SMART brlzneu 264 328 IPR004827 GO:0003700|GO:0006355
Apr3g0260 346 MobiDBLite consensus disorder prediction 323 337 - -
Apr3g0260 346 SUPERFAMILY Leucine zipper domain 267 323 IPR046347 GO:0003700|GO:0006355
Apr3g0260 346 Coils Coil 277 332 - -
Apr3g0260 346 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 345 IPR044827 GO:0003700|GO:0006355|GO:0043565
Apr3g0260 346 MobiDBLite consensus disorder prediction 123 206 - -
Apr3g0260 346 MobiDBLite consensus disorder prediction 1 206 - -
Apr3g0260 346 Gene3D - 267 321 - -
Apr3g0260 346 MobiDBLite consensus disorder prediction 266 289 - -
Apr3g0260 346 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Apr3g0260 346 Pfam bZIP transcription factor 264 326 IPR004827 GO:0003700|GO:0006355
Apr3g0260 346 MobiDBLite consensus disorder prediction 1 22 - -
Apr3g0260 346 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 271 286 IPR004827 GO:0003700|GO:0006355
Apr3g0260 346 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 266 329 IPR004827 GO:0003700|GO:0006355
Apr3g0260 346 MobiDBLite consensus disorder prediction 323 346 - -
Apr3g0260 346 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0260 Apr-Chr3 5074014 5078646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0260 1 345 bZIP Transcription Factor Family AT4G36730 54.467 1.54e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr3g0260 MFMR 6.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0260 K09060 - gmx:778124 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0260 3 5074014 5078646 Apr3g0260 3 5074014 5078646 ECH
Apr3g0260 3 5074014 5078646 Apr7g0997 7 17019618 17025126 ECH